Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00078 ATGGCTCCGTCAAGGAAGTCAAGAAGTGTGAATAAGCGTTTTGGTGCTTTAAATGAGGTCTCCCCAGAAAAAGATGCAATCGATTCAAATAAAAATAACCCGCGGAAAAGGAAATTGTCGGATAAATTAGGATTTCAGTGGAGCAAAGAGGAACTAGAGCGATTTTATGAAGCGTACAGGAAATATGGTAAAGACTGGAAGAAGGTGGCTTCTGCAGTTCGCAACAGATCAGCTGAAATGGTGGAAGCTCTTTTCAATATGAACCGGGCATACTTGTCTCTGCCAGAGGGAACAGCGTCAGTTGTTGGCCTCATAGCAATGATGACTGACCACTATAATGTCCTGGACGGAAGTGACAGTGAAAGAGAGAGTAATGAGGCATCAGCATCTCAGAAACCTCCGAAGCGCATGCGTGGTAAAGTGCAGCTTACTCCACGAAAAGTCGTCTCCCAATCTCGGTCAGTTGCATCTAATGGAGGTTGCTTATCTTTACTCAAAAGGGGGCAATTTGATGATGGCCAGCCTCGTGCAGTAGGTAAAAGGACACCTAGGTTCCCAGTTTACCGAAAGGATGATAGGGAAAATTATGTCTCACCTAATAAAAGAGGTGGAAAACTGGATGTAGATGGTAGCAATGATGATGACGAACATGTAGCAGCACTAGCTTTAACAGAGGGTTTCAGAAGCGTGTCTCCCCAAGTTTCTCAACCTAGTAAAAGGAAGGGGAATCTCAAACGCTCTACAGTTCAGAGCTGGGAAAGAACGATTTGTGGTACTTCTGTTGAAGATCGTTTGGAAGACAGTGTAGGAAGTAGAGGAGCTGAAAATGGAGAACATGATGTAAGTTCTTTAATGTACGTGGAAGGTGTAGGCACAGTAGAAATTCATCGGAAGGGTAAGAGATTTTATGGGAAGAATCAAAAAGTTGAGGATGATGGAAACCATCAACTTGATGATGGTGGAGAAGCATGTAGTGGCACTGAAGAAGAGCTTAACCTCAATGCTTGTAGGGAAAAGATTCGTAGTCAGATTAACAAAGGAAAATCTGGGAAGTTTTCACCACATAGTCAGAGGAAAGGAAGCAGGAAACTTGGTTTTGCAGATGACTGCTCTAACTTGGATGCTTTACACGAATTGGCTGATTTATCTCTGAAGATGCCAACATCTACGATAGAGTCGGAATCATCTGTCCAGTTGAAGGACAAGAAAGGAAACCTTGATAGCGTTAGATCTGTTTTACCTGAAGCTACATCCACAAGTCAATACAGTGACAAAATTAAAGTCGCAGGGGAAAAACAGAAGCTCCCTCAGACAATGGCCACCGAGGGTTCAAGAAAATCCAAACTTGGAAGGGAGTCAGCTCATCATGTTAGTTCTGTATTTGAAGCAAAAGAAAAGCTTCCGACTGCTGATAAGTCATGGAAAAGAAGATGCAAGACCTTGCCATCAAAGTTGCAGGCATTAGATACCAAGATTTTCCCCCCTAGTGAGCAGAAGAATGAGGCAATGTCTGAAGGAGAGAATAGGTCAACAGTGAAAGGTATGCGTACAAGCGAGCCTGTTACCATGTCCATGCAATCATCTTCGCTGAGATCATCAGATAGTTTATTGAGTTCTGAGCAAAAAGAATTAGCACCACCAACACAGACACCTGTGGTAATTAAAGCTTCTTTGCCAAGTAAGAGAAAAACTAGATGCAAAATGAATCCACAACGAGTACTTCTTCCAAAGGAAACGGAGTGTTCTGAGGATGTGTTGAAAAAACAAATTCATAAGAACTATACATCTCTCCAGAGTAGAGCATCTTCAGCGAAGAACTTGCAGGAAAAGCTTTCTGGTTGCCTTTCATCAAATCTGCTTCGCAAGTGGTGCACATATGAATGGTTCTATAGTGCAATTGATTATCCATGGTTCACTAAAAGGGAGTTTATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGGCTGACTTGTGTGGAATGGAGTGTTATCAAAAGCTCACTTGGGAAACCTCGGAGGTTTTCTGAGCACTTACTCTGTGAGGAAAGGCATAAACTCCAACAGTATCGGGAATCTGTGAGGAAACACTATACTGAACTCCGAACTGGTGTTAGAGATGGGCTTCCAACAGATTTAGCTAGACCACTATATGTTGGACAACGAGTCATTGCTATTCATCCAAAAACTAGAGAAATTCATGATGGAAGTGTTCTCACAGTTGACCATGACAGGTGCCGGGTTCAGTTTGTCTGCCCTGATATAGGTGTTGAAATTGTCAAGGATATCGATTGTATGCCTCTGAATCCAATGGATAATATGCCTGAAGGCATTAGGAGAGAGAATACTGTTGGGAAAGTTGGTCTTATGATAAAGGAACCGCAGGTGAATGAAAATGCAGGGCACTCTATGACCTGCGCTCCTGGAGGGCATTTGGAAAATATAATCAGCTCAATTAGTACTCTGGTGAAGCAGGGGGACATAAGACATTCCATATCGCAAACTAAGGCTATCACTCTTGATAAAGCTGGTACACTACAAGCAAATTATACTTCAGTTAGCACTGGGACACACAATCAAGCTAGGGAAGCAGATATTCAGGCCCTTTCTGAGCTAACTCGTGCTCTTGATAAGAAGGAAGCATTGTTGATGGAGCTTAGAAGTATGAACAACTATATTTTAGAAAATCAAAATGAGTTGGAGAGCTTAAAAGATTCAGATTTTTTTAAGAAGCATTACGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGACCAGGTTTCTTCTGCATTGCTCCATTTGAGACAACGAAATAACAACACAGGAAAATGTCAGCCTCCTCGGCTGAAGTCTCCACTAAATTACAGAGTTAATGATATTTTTTCCAGTTCCTTGGATAGCCCTCTCATTTCCCAAGAATCTGGATCTAGTTTCATTGAAATTATCAAATGCTCCAGGTTTAGCGCTAATATTATGGTTGGTGCAGCAATTGAGGCATTTTCTTCACTGAAAGAAGGGGAAGACGCATATGTGAGAATTGGGCAGGTTTTGGATTCTATTGATAATCCGCAGTCAGCATCCAACCCTGCACAAGTTGCAATCGGACCACATGAGCACACTGATTCATTTGCTGTTGGTCGATCTACCTCCTGTTCATCCGAGCCTACTCTTAGAAATGATGCATCGGAACAAAACCAGGTTAATCCTAGTGGAAGAAATGTTGCACAAATTCCCTCAGAGCTCATCACTTCATGTATTGCTACTTTGTTAATGATACAGACTTGTACGGAACGACAATATCCCCCAGCTGAAGTGGCTCAGCTATTAGATTCTGCATTGACTAGCTTGCATCCATGCTGCCCTCAAAATCTTCCTGTTTATAGAGAAATTCATATGTGCATGGGGAGAATCAAAACTCAGATCCTCGCTTTGATTCCAACTTAA 3447 0.4218 MAPSRKSRSVNKRFGALNEVSPEKDAIDSNKNNPRKRKLSDKLGFQWSKEELERFYEAYRKYGKDWKKVASAVRNRSAEMVEALFNMNRAYLSLPEGTASVVGLIAMMTDHYNVLDGSDSERESNEASASQKPPKRMRGKVQLTPRKVVSQSRSVASNGGCLSLLKRGQFDDGQPRAVGKRTPRFPVYRKDDRENYVSPNKRGGKLDVDGSNDDDEHVAALALTEGFRSVSPQVSQPSKRKGNLKRSTVQSWERTICGTSVEDRLEDSVGSRGAENGEHDVSSLMYVEGVGTVEIHRKGKRFYGKNQKVEDDGNHQLDDGGEACSGTEEELNLNACREKIRSQINKGKSGKFSPHSQRKGSRKLGFADDCSNLDALHELADLSLKMPTSTIESESSVQLKDKKGNLDSVRSVLPEATSTSQYSDKIKVAGEKQKLPQTMATEGSRKSKLGRESAHHVSSVFEAKEKLPTADKSWKRRCKTLPSKLQALDTKIFPPSEQKNEAMSEGENRSTVKGMRTSEPVTMSMQSSSLRSSDSLLSSEQKELAPPTQTPVVIKASLPSKRKTRCKMNPQRVLLPKETECSEDVLKKQIHKNYTSLQSRASSAKNLQEKLSGCLSSNLLRKWCTYEWFYSAIDYPWFTKREFMEYLNHVGLGNIPRLTCVEWSVIKSSLGKPRRFSEHLLCEERHKLQQYRESVRKHYTELRTGVRDGLPTDLARPLYVGQRVIAIHPKTREIHDGSVLTVDHDRCRVQFVCPDIGVEIVKDIDCMPLNPMDNMPEGIRRENTVGKVGLMIKEPQVNENAGHSMTCAPGGHLENIISSISTLVKQGDIRHSISQTKAITLDKAGTLQANYTSVSTGTHNQAREADIQALSELTRALDKKEALLMELRSMNNYILENQNELESLKDSDFFKKHYATVLVQLKEASDQVSSALLHLRQRNNNTGKCQPPRLKSPLNYRVNDIFSSSLDSPLISQESGSSFIEIIKCSRFSANIMVGAAIEAFSSLKEGEDAYVRIGQVLDSIDNPQSASNPAQVAIGPHEHTDSFAVGRSTSCSSEPTLRNDASEQNQVNPSGRNVAQIPSELITSCIATLLMIQTCTERQYPPAEVAQLLDSALTSLHPCCPQNLPVYREIHMCMGRIKTQILALIPT* 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00078 1148 MobiDBLite consensus disorder prediction 192 212 - -
Pte15g00078 1148 ProSiteProfiles Myb-like domain profile. 47 86 IPR001005 -
Pte15g00078 1148 MobiDBLite consensus disorder prediction 496 549 - -
Pte15g00078 1148 MobiDBLite consensus disorder prediction 24 39 - -
Pte15g00078 1148 MobiDBLite consensus disorder prediction 1045 1072 - -
Pte15g00078 1148 SMART DIRP_2 629 730 IPR033471 -
Pte15g00078 1148 MobiDBLite consensus disorder prediction 1 39 - -
Pte15g00078 1148 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Pte15g00078 1148 SMART sant 43 91 IPR001005 -
Pte15g00078 1148 Pfam DIRP 628 729 IPR033471 -
Pte15g00078 1148 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Pte15g00078 1148 Gene3D - 6 99 - -
Pte15g00078 1148 MobiDBLite consensus disorder prediction 418 457 - -
Pte15g00078 1148 MobiDBLite consensus disorder prediction 116 152 - -
Pte15g00078 1148 Pfam Myb-like DNA-binding domain 46 82 IPR001005 -
Pte15g00078 1148 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 81 IPR017930 -
Pte15g00078 1148 PANTHER LIN-9 1 1148 IPR010561 GO:0006351|GO:0017053
Pte15g00078 1148 Coils Coil 870 890 - -
Pte15g00078 1148 MobiDBLite consensus disorder prediction 505 546 - -
Pte15g00078 1148 CDD SANT 47 81 IPR001005 -
Pte15g00078 1148 SUPERFAMILY Homeodomain-like 46 90 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00078 Pte-Chr15 555510 570486 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte15g00078 DIRP 3.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00078 - - qsa:O6P43_011108 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00078 15 555510 570486 Pte15g00078 15 555510 570486 RCT