Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00072 ATGCAAGACATTATCGGATCAGTGCGGCGGTCGCTAGTGTTCCGCACTACTCCAGAAGACAATGAAGGCACTGGGTTCGGAGCCGGAAGTGGAACCCTAGTAGACAAGATCAATTCTTGTATACGCAAGTCTAGAGTTTTCACTAGGCCATTGCCAGCACCATCATCACGGCCAATTATCAAGGAAGGTGCCCCCACGATCCGATGGCGCAAGGGCGAGATGATCGGATGCGGTGCATTTGGTCAAGTTTATATGGGTATGAATCTTGATTCCGGAGAGCTTCTAGCAGTCAAGCAGGTTTTGATTGCGGCTAATGGGGCATCAAAAGAGAAGGCCCAGGCCCATATCAAAGAACTCGAAGAAGAAGTTAAGCTTCTCAAAGATTTGTCACATCCCAACATCGTGAGATATCTAGGAACTGCAAGGGAGGAGAACACACTGAATATTCTTTTGGAATTTGTTCCTGGAGGATCAATATCATCACTTTTGGGGAAGTTCGGTTCTTTCCCAGAAGCTGTTGTAAGAACATATACAAAGCAGTTGTTGTTGGGGTTGGAATACTTGCATAAAAATGGAATCATGCATAGAGACATTAAGGGGGCAAATATCCTTGTAGATAATAGAGGTTGTATCAAACTTGCAGATTTTGGGGCATCCAAACAAGTTGTTGAACTGGCCACTGTTTCTGGCGCCAAGTCTATGAAGGGTACACCTTATTGGATGGCTCCTGAAGTCATTCTTCAGACAGGTCATAGCTTCTCTGCTGACATATGGAGTGTTGGGTGTACTGTTATTGAGATGGCCACAGGAAAGCCTCCTTGGAGTCAGCAGTACCAAGAGGTTGCTGCACTTTTCCATATCGGAACAACTAAGTCTCCTCCACCAATTCCTGAGCATCTCTCTTTCGGAGCAAAAGATTTTCTGGTGAAGTGTTTGCAAAAGGAACCAAATGCAAGGCCAACTGCATCGGAGTTATTGCAGCATCCATTTGTTACTGGAGAACAGACTGGGCCTACCATGATTTCACGTAATTCTGCTTTGGCGCATTCTGGAAGTCAATCATTATTTGGCACTAATACTGAAACCTATAAAATATGGACTGCTTCAGACTCGATGGATGTTTGTAATTTGGGCAGTCTGGATTGCTCAACTGTTTGTAAAGAGAGACTCTCAGGAAATCAACAATGTTGGGGAATGAATGGTGATGATGATGATATGTGTAAACTCGATGACCAAGATGATTTTAAGATGGTTGAAATGAAACCAATCTCTCCTCTTATGTCAGACAATTTTAAGAGTTTCAATCCAATGATTGAGCCCTCTGATAATTGGGGATGCAAATCTGGTGATAGCCTTGAACATGCACAACAAGGATTGAATACCCATGTTGGTCAAATTTTTATCCGGGATGGTGACTCTGTAGTTACTGATGATGACCAGAAGGTGTTTTCCTTTCCTTACGGGACATCCCTATGCGAAGACGATGATGAAGTCACTGAGTCCAAAATTCAAGCCTTCCTGGATGAGAAGGCTCTGGAACTGAAGAAAATGCAGACACCTTTGTATGAAGAATTTTACAACAGTATGATTGGATCTTGCTCCCCAGATCATCTGGATTGCAGTAGCGATGAAGCTGCTCTGAAGTACTTGAAGCTACCTCCAAAAAGTCCATCACCCAGTCGAGGTCCAGTCTGCACCTCCTCTAAAGCAGTTGACAATGTTAATGCTGGAAGCCCCGGAAGTAATAGCAGATGGCAATCAAATATTGGCAATCCATGTGATCATAGTAGGCTGGATGCTTCATCCCCACCAACAAATGACTGGAAAGGACTTGTAGCAGATTCTAAGCTGGAGCAAGGAAGTCCAAGTGTTAGCTTTGCCGAGAGACAGAGAAAGTGGAAAGAAGAGCTTGATCAAGAGCTTCAAAGGCAACGAGAGATGATGCGGCAAGCTGGTGTGGGAGGGAAAACATCATCACCTAAACATCATCACAAGCAGAGAGAGCTGACAAGATTTGCTTCTCCTGGGAAATGA 2034 0.442 MQDIIGSVRRSLVFRTTPEDNEGTGFGAGSGTLVDKINSCIRKSRVFTRPLPAPSSRPIIKEGAPTIRWRKGEMIGCGAFGQVYMGMNLDSGELLAVKQVLIAANGASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTAREENTLNILLEFVPGGSISSLLGKFGSFPEAVVRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNRGCIKLADFGASKQVVELATVSGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSPPPIPEHLSFGAKDFLVKCLQKEPNARPTASELLQHPFVTGEQTGPTMISRNSALAHSGSQSLFGTNTETYKIWTASDSMDVCNLGSLDCSTVCKERLSGNQQCWGMNGDDDDMCKLDDQDDFKMVEMKPISPLMSDNFKSFNPMIEPSDNWGCKSGDSLEHAQQGLNTHVGQIFIRDGDSVVTDDDQKVFSFPYGTSLCEDDDEVTESKIQAFLDEKALELKKMQTPLYEEFYNSMIGSCSPDHLDCSSDEAALKYLKLPPKSPSPSRGPVCTSSKAVDNVNAGSPGSNSRWQSNIGNPCDHSRLDASSPPTNDWKGLVADSKLEQGSPSVSFAERQRKWKEELDQELQRQREMMRQAGVGGKTSSPKHHHKQRELTRFASPGK* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00072 677 SMART serkin_6 69 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00072 677 MobiDBLite consensus disorder prediction 561 603 - -
Pte15g00072 677 MobiDBLite consensus disorder prediction 645 677 - -
Pte15g00072 677 Pfam Protein kinase domain 70 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00072 677 Gene3D Transferase(Phosphotransferase) domain 1 68 365 - -
Pte15g00072 677 CDD STKc_MAPKKK 68 331 - -
Pte15g00072 677 MobiDBLite consensus disorder prediction 553 610 - -
Pte15g00072 677 FunFam Mitogen-activated protein kinase kinase kinase 2 68 360 - -
Pte15g00072 677 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 58 340 - -
Pte15g00072 677 Coils Coil 102 129 - -
Pte15g00072 677 ProSiteProfiles Protein kinase domain profile. 69 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00072 677 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Pte15g00072 677 SUPERFAMILY Protein kinase-like (PK-like) 68 332 IPR011009 -
Pte15g00072 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Pte15g00072 677 FunFam Serine/threonine-protein kinase STE11 65 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00072 Pte-Chr15 522128 527757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00072 1 678 MAP Kinase Kinase Kinase AT1G54960 57.082 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte15g00072 Pkinase 2.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00072 K20606 - qsa:O6P43_011113 902.508