Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00047 ATGTCGGTTGGCTTAAGTTCTATCGTGTCGAGATTTCAAATACTGAACTTTTCTGATCATGCCTCTGTGGTCTCAATGAACCTATTCGTGGCACTCCTCTGTGCTTGCATTATAGTTGGTCATCTTCTCGAGGAGAACCGTTGGATGAATGAATCAATCACTGCCCTTCTGATAGGTCTTGCTACTGGTGTGGTGATTTTGCTGATCAGTGGGGGTAAAAGCTCACGTCTTCTTGTTTTCAGCGAAGATCTATTCTTTATATATCTTCTTCCTCCAATTATATTCAATGCCGGGTTCCAAGTGAAGAAGAAGCAGTTCTTTGTTAACTTCATAACCATTGTGCTATTTGGTGCTATTGGTACCTTGATATCGTGTGCCATCATAAGTTTGGGTGTGGCACAGTTTTTCAAAAGGCTGGACATCGGTCCATTAGAAATTGGGGACTATTTAGCAATTGGTGCGATATTTTCTGCAACAGATTCTGTGTGCACTTTGCAGGTGCTGAATCAAGATGAAACACCGTTATTATATAGTCTTGTATTTGGGGAAGGTGTTGTGAATGATGCTACTTCGGTGGTGCTTTTTAATGCTATTAAGAGCTTTGACATCAGCAAAGTTGATCCAGGGATTGGTTTCCACTTTATTGGCAATTTCTTTTACCTGTTTATTGCAAGCACATTACTTGGTGTTGTGGTTGGCCTTCTTAGTGCGTATATCATAAAAAAGCTCTATATTGGAAGGCACTCTACTGATCGTGAAGTTGCTCTTATGATGCTGATGGCATACCTTTCATATATGTTGGCCGAATTGTGTGATCTGAGTGGGATTCTCACTGTATTCTTTTGTGGGATTGTGATGTCTCACTACACTTGGCATAATGTTACGGAGAGCTCAAGAATTACAACCAAGCATACTTTTGCAACCATGTCATTTGTTGCAGAGATTTTCATCTTCCTTTATGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAGATTTGTGAGTGATAGTCCTGGAACATCTGTTGCGGTCAGTGCAATACTGTTGGGTCTAGTTCTAGCCGGAAGAGCAGCCTTCATATTTCCCCTATGTTTTTTATCGAACTTAATTAAAAGATCTTCACAAGAGAAAATCAGCTTCAGACAACAGGTGATAATCTGGTGGGCTGGACTTATGCGAGGTGCTGTATCAATAGCACTTGCATATAACAAGTTCACTATGTCAGGGCATACTCAAATGCAGTCAAGTGCAATCATGATCACTAGCACCATAACAGTCGTGCTTTTCAGCACAATGGTCTTTGGTTTGATGACTAAACCCCTCATTAGATTCTTGCTTCCTCATTCAAAACACACGGCCAGCATGTTACAGTCGAATCCATCTACTCCAAAATCAGTTACTGTGCCACTTCTTGTACATTCCCCGGTGTCTGAAGCTGATAGGGATGGCACCCAATTCGTTCTGCGTCCTAACAGCATACGTGCACTCTTGACACGCCCAACGCACACAGTCCATCGTTACTGGCGCATGTTTGATGATGCTTTCATGCGACCTGTCTTTGGTGGCAGGGGATTTGTTCCTGTTGCTCCTGGTTCGCCAACTGAACGTGGTCAAAATCAGTGGCAGTAA 1629 0.4248 MSVGLSSIVSRFQILNFSDHASVVSMNLFVALLCACIIVGHLLEENRWMNESITALLIGLATGVVILLISGGKSSRLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVLFGAIGTLISCAIISLGVAQFFKRLDIGPLEIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDISKVDPGIGFHFIGNFFYLFIASTLLGVVVGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCDLSGILTVFFCGIVMSHYTWHNVTESSRITTKHTFATMSFVAEIFIFLYVGMDALDIEKWRFVSDSPGTSVAVSAILLGLVLAGRAAFIFPLCFLSNLIKRSSQEKISFRQQVIIWWAGLMRGAVSIALAYNKFTMSGHTQMQSSAIMITSTITVVLFSTMVFGLMTKPLIRFLLPHSKHTASMLQSNPSTPKSVTVPLLVHSPVSEADRDGTQFVLRPNSIRALLTRPTHTVHRYWRMFDDAFMRPVFGGRGFVPVAPGSPTERGQNQWQ* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00047 542 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte15g00047 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte15g00047 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte15g00047 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte15g00047 542 NCBIfam sodium/hydrogen exchanger 3 24 446 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Pte15g00047 542 Gene3D - 146 197 - -
Pte15g00047 542 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Pte15g00047 542 PANTHER SODIUM/HYDROGEN EXCHANGER 19 520 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00047 Pte-Chr15 385871 389976 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00047 6 540 Antiporters AT3G05030 76.580 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00047 - - zju:107412105 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00047 15 385871 389976 Pte15g00047 15 385871 389976 RCT