Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00046 ATGGGGTGTGTGATCAGTAGGGAAGATTCTTCGGGGCTGGTATCTGAGGTAAAGGAAGAGAGGAGTTTGAGTGTTGATTCTAATAGGAAAGTAGATGAAGTTCCGGAAAGTAAAGTGGAGAGAAAAGTTATCGAAGTTCAAAATGATGACAAACAGAAGGAAGAGAAGACATGTCATGAAAACAGCGGTGTTCAGCGAGCTAGGGGCGAAAGAAGAAGGTCAAGGCCCAATCCAAGGCTAAGTAATCTGTCCAAGAATGTTCGAGGGGAGCAAGTTGCAGCTGGATGGCCTCAGTGGCTAACAGCAGTATGTGGTGAAGCACTCAGCGGATGGACCCCTAGAAAGGCAGACACTTTTGAGAAAATTGATAAGATTGGGCAAGGAACATATAGTAATGTCTACAAAGCCAAAGACATGCTAACGGGTAAAATTGTTGCACTAAAGAAGGTTCGTTTTGACAATTTGGAGCCGGAGAGTGTAAAATTTATGGCTAGAGAGATTCTTATATTGAGGAGACTGGATCATCCCAATGTTATAAAGTTGGAAGGGTTAGTCACATCAAGGATGTCATGTAGTTTGTACCTAGTGTTTGAGTATATGGAGCATGATTTAGCTGGACTTGTTGCCAGCCCAGGAATAAAATTTACAGTCTCTCAGGTCAAGTGTTTTATGCATCAAATACTATCAGGACTTGAGCACTGTCATAAATGTCATGTGCTTCACCGCGATATCAAAGGGTCAAATCTTCTCATTGACAATGAAGGAACATTAAAGATAGCTGATTTTGGATTGGCATCATTTTTCGATCCAAACCACAAGCACCCCATGACTAGTCGTGTGGTTACCCTCTGGTACCGGCCACCAGAGCTTCTTCTAGGGGCTACTGACTATGGTGTTGGTGTGGACTTATGGAGTGCTGGGTGTATTTTGGCAGAGTTGTTGGCTGGGAAGCCAATAATGCCTGGTCGCACAGAGGTGGAGCAATTACACAAGATATACAAGCTATGTGGTTCACCTACTGAGGAGTATTGGAAAAAGTCAAAGCTGCCCAATGCCACTTTATTTAAACCACGAGACCCATACAAAAGAAATATAAGGGAGACATTTAAAGATTTCCCACCATCTGCAGTGGCCCTGATAGATACTCTTCTCGCAATTGATCCAGCAGAAAGGCAGACTGCCTCAGCTGCTCTAAAGAGTGAGTTCTTCAGCACAGAACCTTATGCTTGTAGTCCTTCTAGCCTTCCAAAATATCCGCCAAGCAAGGAAATGGATGCGAAAATAAGAGATGATGAAGCTAGGAGACTAAGAGCTGCTGCAAAAGCTCAGGATGGTGCTAAGAAAACACGCACTCGTGATCGTGCAGTAAAAGCTGTTCCTGCTCCTGAAGCCAATGCAGAGTTTCAGTCCAATATCGATAGACGACGACTGATTAGTCATGCAAATGCAAAGAGCAAGAGTGAGAAATTTCCACCGCCACACCAAGATGGGCAGCTAGGTTTTCCCTTGGGAGCTTCACACCATTTTGATCCAGACGTTGTTCCACCGGACGTCCCTTTTAGTTCAACCTCATTCGCTTACACGAAGGACCAGTTCCAAACTTGGTCAGGTCCAATTGCTGATCCTGCTGGCCGTGGTGCTCCCAGGAGGAAGAAGCATGGTGCAGGGGATAATGCATTAGACACATTTAGGTCTCAGACTGGAGTACAGAGAGAGAAAGTTAAAGGAAAGAAAACTATGGCCTAG 1746 0.4462 MGCVISREDSSGLVSEVKEERSLSVDSNRKVDEVPESKVERKVIEVQNDDKQKEEKTCHENSGVQRARGERRRSRPNPRLSNLSKNVRGEQVAAGWPQWLTAVCGEALSGWTPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLVASPGIKFTVSQVKCFMHQILSGLEHCHKCHVLHRDIKGSNLLIDNEGTLKIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIYKLCGSPTEEYWKKSKLPNATLFKPRDPYKRNIRETFKDFPPSAVALIDTLLAIDPAERQTASAALKSEFFSTEPYACSPSSLPKYPPSKEMDAKIRDDEARRLRAAAKAQDGAKKTRTRDRAVKAVPAPEANAEFQSNIDRRRLISHANAKSKSEKFPPPHQDGQLGFPLGASHHFDPDVVPPDVPFSSTSFAYTKDQFQTWSGPIADPAGRGAPRRKKHGAGDNALDTFRSQTGVQREKVKGKKTMA* 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00046 581 Gene3D Transferase(Phosphotransferase) domain 1 202 443 - -
Pte15g00046 581 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Pte15g00046 581 CDD STKc_CDK9_like 119 403 - -
Pte15g00046 581 SMART serkin_6 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00046 581 PANTHER CELL DIVISION PROTEIN KINASE 117 407 - -
Pte15g00046 581 FunFam probable serine/threonine-protein kinase At1g54610 202 443 - -
Pte15g00046 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Pte15g00046 581 ProSiteProfiles Protein kinase domain profile. 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00046 581 Gene3D Phosphorylase Kinase; domain 1 106 201 - -
Pte15g00046 581 MobiDBLite consensus disorder prediction 436 457 - -
Pte15g00046 581 MobiDBLite consensus disorder prediction 535 581 - -
Pte15g00046 581 FunFam probable serine/threonine-protein kinase At1g54610 106 201 - -
Pte15g00046 581 SUPERFAMILY Protein kinase-like (PK-like) 113 408 IPR011009 -
Pte15g00046 581 MobiDBLite consensus disorder prediction 1 87 - -
Pte15g00046 581 MobiDBLite consensus disorder prediction 12 77 - -
Pte15g00046 581 MobiDBLite consensus disorder prediction 436 475 - -
Pte15g00046 581 Pfam Protein kinase domain 119 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00046 Pte-Chr15 378943 382883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00046 111 443 Core Cell Cycle Gene Families AT5G10270 52.436 5.75e-122 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pte15g00046 Pkinase 4.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00046 K08819 - qsa:O6P43_011163 902.508