Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00039 ATGGCATCCCAGCAGCTAAATGCAGTTTTTCATGAAGACCTCGACGATGACGACAACGAGTCTCCAGAAGATGAAGAAGACCTTGACGACGAAGACGTTTTGGGCGTTCCCGAAGATGAAGATGACAAGAACAACGAAGCTTCGCCTTCTTCAACTGTTGCCGTTCCAAGTGTTTCAGCCGCTGTCACAGTTGCCGTTCCAGCTTCCACTCTTTCTAATGTAGACGGCACTCAAATCTTGACCTCTACAACGTCAAGACCCACCCCGACAGTTGTCGTCTCTGATTCCCCCGATCAAAAGCGGCAGCGAGCCGAGCCGATCGACGAGAAGAAGCCCTTTGATGATTCCCGTAGGCTCTTTCAACGACTGTGGACTGACGATGATGAGATCGAGCTCTTGCAGGGGTTCCTTGAATATACAACACAACGGGGTATATCTCACCACAACGATACGTCGCAGTTCTACGACCAAATCAAGTCCAAGCTTCAGCTCGATTTCAATAAGAACCAGTTGGTTGAGAAGCTTCGGAGGTTGAAGAAGAAGTACAGGAATGTTCTCAACAAGATCAATTCTGGTAAGGAATTCTCCTTCAAAAGCCCACATGATCAAGCTACCTTTGAAATTTCTCGCAAGATCTGGAGTAATATTGGTCAAATTGGTTGTGGAAATGCTGACGACACTGTCTTGGATGATGATGAGCCCAACACTAATCCCAACGCTAACTATAGTCCATCATTAGTTATTAAGAGTGAGGAAATTGTCGGCAATAGAACTCCTACATCAAGAAAGCGATATCGGTCCAAGACTGGGATGAAGATTGATGAGAAGCGTGTGTTCAGTGACGGGTTGGCTTCAGCAAAAGATAGCAATTTCATTGCTATTACTAGTAGCAATTGTGATAACAACAATAGTACTGGTAACCTAAACGTTCCGGGTCTGATTGAGGAAACGGTTAGGAGTTGTCTGTCGCCCTTGTTCAAGGAATTGGTCACCAGTGCCATGGGAGGACAGATTGGTGTAAGAGGGTTTGGTGCATTGCAGATGAATTTGATGCCATTGGGTTGCGGGGGACCTGCAATGTTGAATTTTGGAAACGGGGATGTGTTGGATGAGAAGTGGAGGAAACAACAGATTTTGGAGTTGGAGGTTTATTCAAGGCGGTTAGAATTGGTGCAGGAACAGATTAAGGCTGCATTGGATGAGTTGAGATCCAGTGGAGGAGGATGA 1227 0.4605 MASQQLNAVFHEDLDDDDNESPEDEEDLDDEDVLGVPEDEDDKNNEASPSSTVAVPSVSAAVTVAVPASTLSNVDGTQILTSTTSRPTPTVVVSDSPDQKRQRAEPIDEKKPFDDSRRLFQRLWTDDDEIELLQGFLEYTTQRGISHHNDTSQFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVLNKINSGKEFSFKSPHDQATFEISRKIWSNIGQIGCGNADDTVLDDDEPNTNPNANYSPSLVIKSEEIVGNRTPTSRKRYRSKTGMKIDEKRVFSDGLASAKDSNFIAITSSNCDNNNSTGNLNVPGLIEETVRSCLSPLFKELVTSAMGGQIGVRGFGALQMNLMPLGCGGPAMLNFGNGDVLDEKWRKQQILELEVYSRRLELVQEQIKAALDELRSSGGG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00039 408 Coils Coil 374 401 - -
Pte15g00039 408 Coils Coil 168 188 - -
Pte15g00039 408 MobiDBLite consensus disorder prediction 224 243 - -
Pte15g00039 408 MobiDBLite consensus disorder prediction 13 39 - -
Pte15g00039 408 Pfam Protein of unknown function, DUF573 120 214 IPR007592 GO:0006355
Pte15g00039 408 PANTHER BNAANNG10740D PROTEIN-RELATED 16 401 IPR007592 GO:0006355
Pte15g00039 408 MobiDBLite consensus disorder prediction 78 97 - -
Pte15g00039 408 MobiDBLite consensus disorder prediction 1 56 - -
Pte15g00039 408 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00039 Pte-Chr15 336130 337356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00039 41 408 GeBP Transcription Factor Family AT5G28040 47.328 1.97e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Pte15g00039 DUF573 7.1e-35 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00039 - - pcin:129289843 454.521