Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00029 ATGGACAGGGTGTTTTCAATGGGTGAGTTGGTCGACCAGTTTTGGTCACCGCCGTCATTATCGACGGAATTAGCTGATGGGTCATCCAAAATGAACAGAAGCCCATCTGAATGGGCCTTTGAGAAGTTCTTAGAGGAGGAAGTTTCTTCTTTGCCCACTCAGAATACCCAGATATCTCCTCCTCACACTGCAACGGCAGCGGCTTGTTCTTCATCAGTTCCAACCAAAAACGATCATGCTGTTGTCGTTGAGATCAAGAACAACGATGCTCTGTCACGGGCACCTACTACCGAACGGGATCAGATTAGGACACCGGTCCATGTTATGTCTACTCAAAAGGATGGAATGATGAACGCAACGACAGCTGCTTTGTATAAAAATGAGGCTCCTACAGATGTTCCGAGGGACTCCCAGGCCTATCAGGACTTCCTCAAGAGCAAACTTAATATCGCTTGTGCAGCCGTGGCTTTGACCCGGGGACCTTTCATTAAATCTCAGGAGGCCAATACCATTGCTGATAGTGGATCACAAGCTCCTAATTCTACTCACAAGGGTTCCCTAGCTACTTTCAAAGGAGCTGGATGTGATCCATTAAGAGCAAATGATAAAGACATGAATGGACCGGTCGGTATTCCTTCCTTACCATCCATGCAAAAGAAACCCCTAGCAGTTGCAAGGCAAAGCACAAGTGGGTCATCAAGAGAACCATCAGATGATGATGAAGCTGATGTTGATATTGAGCTCTCAGAGAATATGGGCACTGCTGATGTTAAACGCGTAAGGAGAATGCTTTCAAATAGGGAATCAGCTAGACGCTCGAGAAGAAGAAAGCAGGAACATCTGACAGAGCTTGAGACACAGGTTTCCCAATTAAGGGGCGAGAATTCATCACTTTTGAAGCGACTGACTGATGTAAGCCAGAAGTACACTGATGCAGCAGTTGACAACAGAGTTCTAAAGGCAGATGTTGAAACTTTGAGAGCAAAGGTGAAGATGGCGGAGGAGACTGTCAAAAGAATCACGGGCTTGAATCCCATATTACATGCCATGTCTGAAATGTCGATGGGAATTCCAGCCTTTGATGGAAGCCCTTCCGATTCAGCAGATGCTGCTGTTCCTGTCCAGGAGGATCCGAATCTTGGATTTTATCAGGCTAATTCTAACAACCATATATCCAGTCGTAACCTTAGTGGTGTCAACAATGTGTTGGGTGATATTCCTCCTCCCATCGATGACTCAAGTGCAGCTGTTGCTGCTGGGAACAAGATGGGGCAAGCATCTTCTTTGCAGCGTATCGAAAGCTTGGAGCATCTACAAAAGCGGATTCGTGGAGGAGTTGATGCATGTGGATCCCAGTCCAGCAGGGAACAGCGGTAG 1377 0.4677 MDRVFSMGELVDQFWSPPSLSTELADGSSKMNRSPSEWAFEKFLEEEVSSLPTQNTQISPPHTATAAACSSSVPTKNDHAVVVEIKNNDALSRAPTTERDQIRTPVHVMSTQKDGMMNATTAALYKNEAPTDVPRDSQAYQDFLKSKLNIACAAVALTRGPFIKSQEANTIADSGSQAPNSTHKGSLATFKGAGCDPLRANDKDMNGPVGIPSLPSMQKKPLAVARQSTSGSSREPSDDDEADVDIELSENMGTADVKRVRRMLSNRESARRSRRRKQEHLTELETQVSQLRGENSSLLKRLTDVSQKYTDAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPILHAMSEMSMGIPAFDGSPSDSADAAVPVQEDPNLGFYQANSNNHISSRNLSGVNNVLGDIPPPIDDSSAAVAAGNKMGQASSLQRIESLEHLQKRIRGGVDACGSQSSREQR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00029 458 MobiDBLite consensus disorder prediction 198 251 - -
Pte15g00029 458 Gene3D - 257 311 - -
Pte15g00029 458 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 256 308 IPR004827 GO:0003700|GO:0006355
Pte15g00029 458 FunFam BZIP transcription factor 256 307 - -
Pte15g00029 458 SUPERFAMILY Leucine zipper domain 258 309 IPR046347 GO:0003700|GO:0006355
Pte15g00029 458 Coils Coil 267 301 - -
Pte15g00029 458 Coils Coil 316 336 - -
Pte15g00029 458 CDD bZIP_plant_GBF1 259 309 IPR045314 GO:0003700|GO:0006355
Pte15g00029 458 PANTHER BASIC LEUCINE ZIPPER 63 1 447 - -
Pte15g00029 458 Pfam Basic leucine-zipper C terminal 325 446 IPR020983 -
Pte15g00029 458 SMART brlzneu 254 318 IPR004827 GO:0003700|GO:0006355
Pte15g00029 458 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 261 276 IPR004827 GO:0003700|GO:0006355
Pte15g00029 458 Pfam bZIP transcription factor 256 308 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00029 Pte-Chr15 275910 280508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00029 1 432 bZIP Transcription Factor Family AT4G02640 35.666 7.53e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte15g00029 bZIP_C 6.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00029 K25784 - cave:132172074 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00029 15 275910 280508 Pte15g00029 15 275910 280508 RCT