Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00021 ATGACAACTCCGGTGACTATAACAGTAGGCTCCCATGTCTGGGTAGAAGATCCAGATTTATCTTGGGTTGATGGACAAGTAACAAAAATTACTGGACAGGAAGCCCAGATCGACGCTACCAATGGCAAGAAGGTTACAACAAAACTATCAAAAATACATCCGAAGGATATGGAAGCTCCAGCTGGTGGAGTGGATGATATGACGAGGCTTTCTTATTTACATGAGCCTGGAGTTCTTCAGAATTTGAGAATTAGATTTGACCTCAATGAAATCTATGAAATCGAAAAATACAAATTAGGAAATCCAAAAACATTTCACTATCTCAACCAGTCAAATTGTTATGAACTGGTTGGAGTAAGTGACGCCCATGATTACCTTGCTACTAGGAGAGCTATGGATGTGGTAGGAATTGGTGCAAAAGATCAGGAAGCAATATTTCGGGTTATTGCCGCAATTCTTCATCTTGGTAACATTGTTTTCGCTAAAGGAAACGAGGTTGATTCATCCTTGCCTAAAGATGACTCGGCTAAATTCCACCTAAAGATGACCGCTGAACTTCTCATGGTTGATCCTAATGGATTGGAAGATGCATTATGCAAGCGTGTTATGGTCACCCCTGAAGAAGTTATAAAGCGTAGTCTTGATCCACAAAGTGCAGCTATTAGCAGGGATGGTTTAGCTAAAACCATATATTCTAGATTGTTTGATTGGTTGGTTGATAAAATCAATGTCTCAATAGGACAGGATCCCAATTCGAAAACTCTGATAGGGGTCCTTGACATCTATGGTTTTGAAAGTTTTAAGACCAACAGTTTTGAGCAGTTTTGCATTAATTTTACAAATGAGAAGTTGCAGCAACATTTTAACCAGCATGTCTTTAAGATGGAACAAGAAGAATACACGAAGGAGGCGATTGACTGGAGCTACATTGAATTTGTTGATAATCAGGATGTTTTAGATCTTATTGAAAAGAAACCTGGTGGAATAATTGCTCTCCTCGATGAAGCTTGTATGTTCCCAAAGTCAACACATGAAACGTTTGCCAACAAGCTTTATCAAACATTTAAGAATCACAAACGCTTTATAAAGCCAAAATTATCTCGAACAGATTTCACTATTGCTCACTATGCAGGGGAGGTGCTTTATCAATCTGATCAATTTTTAGACAAAAATAAGGACTACGTTGTTCCTGAACATCAAGATCTGTTGGGTGCTTCCAAATGCTCCTTTGTAGCAGGTCTTTTTCCTCCCCTTCCTGAAGAGACATCTAAATCTTCCAAATTTTCGTCTATTGGTTCTCGTTTTAAGGTTCAACTTCAGCAATTGATGGAGACATTAAACTCTACTGAACCTCACTATATTCGATGTGTGAAGCCAAATAACCTTCTCAAACCTTCCATATTTGAGAATGTCAACATTATGCAACAACTTCGATGTGGTGGTGTTTTAGAGGCTATCCGGATCAGCTGTGCTGGATTTCCTACTCGAAAACCTTTTTTTGAATTCGTAAACCGTTTTGGACTCCTTGCACCTGAGGTCCTGGAGAAAAACCCTGACGAAAAGGAGGTCTGCAGAAAGATTTTGGAAAAGATGGGGCTTAAAGGGTTTCAGATTGGAAAAACAAAGGTGTTTCTAAGAGCAGGCCAGATGGCTGATTTAGATGCTAGGAGAGCTGAGGTACTCAGCAGTGCAGCAAAAATCATCCAAAGACGTGTGAGGACTCATTATGCTCGCAAGCATTACCTTGCACTGCGAGATGCTACTGTTTCTCTGCAAGCTTTATGCAGAGGAAGACTTGCTTGCAAAATCTTCGAGAATATGAAAAGAGAAGATGCTTCTGTGAAAATTCAGAAACATTTACGCAGATATCAAGCAAGGAAATCCTTTCGAACACTCCATGCTTCAGTATTGACTCTGCAGACAGGCTTAAGGGTAATGGCTGCTCGTAATGAGTTCAGATTTCGGAAAAAGACTAAAGCAGCCATCCTTATACAGGCCAGGTGGCGATGTTATAGAGCTTCATCTTATTATAACAAGCTTAAAAGAGGTACAAAGCTTGCACAATGCAGATGGAGAGGACGCGTCGCCAGAAAAGAGCTTAGGAAGCTCAAAATGGCTGCACGAGAAACAGGTGCACTTAAAGAAGCAAAGGATAAGCTTGAAAAAAAGGTGGAGGAACTTACTTGGCGTCTACAATTAGAGAAACGATTAAGGACAGATCTTGAGGAAGCCAAAGCAGAGGAGGTTGCCAAATTGCAAAAGTCACTGCAAGAAATGCAATGCAAAGTTGAAGAAGCAAATGCTTTACTTATTAAGGAAAGAGAGGCAGCAAAGAAGGCCATTGAAGAAGCACCTGCTGCTGTCAAAGAAACCCAGGTTTTCGTTGAAGACACTGAAAAGATTAACTCTTTAAAAGAAGAAGTGGAAAGCCTAAAGACTTCACTGGAGTCAGAGAGACAGAAAACAGGTGATTTTGAAAGCAAGTACAAGGAAGCCCAAACTTTGCATGAAGAACGGGGTAAAAAATTGGAAGAGACAGATAAAAAGGTTTATCAGCTCCAGGAATCTTTGAAAGGGCTGGAAGAGAAGATCACCAACTTAGAATCAGAGAATCAAGTTCTACGTCAACAATCTGTGTCTATGGCACCCAATAAGTTCCTTTCTGCACGCTCCAGATCCATATCTCAGAGAGTTCCTGAAGCTGGTCATATTGGAGGAGAAGCAAAGGCACCATTGGATTTGCATAGCGCTTCAATGTTCCAAAGGCAACTTTCTGAAGTGGAAGCCAAACCGCAAAAGTCGCTAAATGAGAAGCAACAAGAGAATCAAGAGTTACTCATCAGATGCATTGCGCAACATTTAGGCTTTCAAGGGAACAGGCCTAGTGCCGCTTGTATCATATACAAATGCCTTTTGCAGTGGAGATCATTTGAAGTTGAGAGAACTAGTGTATTTGATCGGATTGTTCAGACTATTGGTCAAGCCATTGAGACCCAGGATAACAATGATGTCTTGGCTTATTGGCTATCAAATGCTTCCACACTCCTTTTGTTACTCCAACGCACACTAAAGGCAAGTGGTGCAGCTGGAATGGCTCCCCAACGTCGCCGTTCATCATCAGCAACACTCTTTGGAAGGATGACACAAAGCTTTCGTGGAACCCCGCAAGGAGTCAATCTTTCCCTAATAAATGGTGGTGTGGGTGGTGGAGTGGATTCTTTACGTCAAGTTGAAGCCAAATATCCTGCTTTGCTTTTCAAACAACAGTTAACTGCATATGTTGAAAAAATTTATGGAATGATCAGAGATAATTTAAAGAAAGAAATCTCTCCATTGCTTGGGTTGTGTATCCAGGCACCAAGGACATCCAGAGCCAGCCTTGTCAAGGGAGCGTCCCGGTCTGCTGGCAATACTGAAGCACAACGAGCTTTAATTGCACACTGGCAAGGAATTGTCAAGAGTCTTGGCAGCTTCTTGAACACTTTGAAGGAAAATCACGTCCCACCATTTCTCGTTCGTAAGGTTTTCACACAAATATTTTCTTTCATCAACGTTCAACTATTCAACAGTCTTCTCTTAAGACGTGAATGCTGCTCGTTTAGTAATGGCGAATATGTTAAAGCCGGATTGGCTGAATTGGAGCATTGGTGCTATAAGGCCACGGATGAGTATGCAGGTTCAGCTTGGGATGAGCTTAAACACATAAGGCAGGCTATTGGATTTTTGGTTATTCATCAAAAACCAAAGAAAACACTGGATGAAATAAGCCATGATTTGTGCCCAGTTCTTAGCATACAGCAACTATATCGAATTAGCACCATGTACTGGGACGACAAGTATGGTACACACAGTGTGTCTCCGGATGTTATATCCAACATGAGAGTGCTGATGACTGAAGATTCAAACAATGCAGTTAGTAATTCTTTCTTGTTGGATGATGATTCAAGCATTCCCTTTTCCGTTGATGATATCTCGAAGTCGATGGCGCAAATTGATATATCTGATATTGAACCGCCGCCACTCATTCGAGAAAACTCAGGGTTTAGCTTCTTGTTGCCACTGGCAGATTGA 4071 0.4117 MTTPVTITVGSHVWVEDPDLSWVDGQVTKITGQEAQIDATNGKKVTTKLSKIHPKDMEAPAGGVDDMTRLSYLHEPGVLQNLRIRFDLNEIYEIEKYKLGNPKTFHYLNQSNCYELVGVSDAHDYLATRRAMDVVGIGAKDQEAIFRVIAAILHLGNIVFAKGNEVDSSLPKDDSAKFHLKMTAELLMVDPNGLEDALCKRVMVTPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKTLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRTDFTIAHYAGEVLYQSDQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEETSKSSKFSSIGSRFKVQLQQLMETLNSTEPHYIRCVKPNNLLKPSIFENVNIMQQLRCGGVLEAIRISCAGFPTRKPFFEFVNRFGLLAPEVLEKNPDEKEVCRKILEKMGLKGFQIGKTKVFLRAGQMADLDARRAEVLSSAAKIIQRRVRTHYARKHYLALRDATVSLQALCRGRLACKIFENMKREDASVKIQKHLRRYQARKSFRTLHASVLTLQTGLRVMAARNEFRFRKKTKAAILIQARWRCYRASSYYNKLKRGTKLAQCRWRGRVARKELRKLKMAARETGALKEAKDKLEKKVEELTWRLQLEKRLRTDLEEAKAEEVAKLQKSLQEMQCKVEEANALLIKEREAAKKAIEEAPAAVKETQVFVEDTEKINSLKEEVESLKTSLESERQKTGDFESKYKEAQTLHEERGKKLEETDKKVYQLQESLKGLEEKITNLESENQVLRQQSVSMAPNKFLSARSRSISQRVPEAGHIGGEAKAPLDLHSASMFQRQLSEVEAKPQKSLNEKQQENQELLIRCIAQHLGFQGNRPSAACIIYKCLLQWRSFEVERTSVFDRIVQTIGQAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLSLINGGVGGGVDSLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGASRSAGNTEAQRALIAHWQGIVKSLGSFLNTLKENHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMAQIDISDIEPPPLIRENSGFSFLLPLAD* 1357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00021 1356 Coils Coil 801 821 - -
Pte15g00021 1356 Coils Coil 703 737 - -
Pte15g00021 1356 SMART MYSc_2a 57 559 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g00021 1356 Gene3D Myosin VI head, motor domain, U50 subdomain 138 427 - -
Pte15g00021 1356 FunFam unconventional myosin-Va 563 611 - -
Pte15g00021 1356 Pfam IQ calmodulin-binding motif 611 630 IPR000048 GO:0005515
Pte15g00021 1356 Pfam IQ calmodulin-binding motif 563 581 IPR000048 GO:0005515
Pte15g00021 1356 Pfam IQ calmodulin-binding motif 658 677 IPR000048 GO:0005515
Pte15g00021 1356 ProSiteProfiles Dilute domain profile. 986 1299 IPR002710 -
Pte15g00021 1356 ProSiteProfiles IQ motif profile. 584 613 IPR000048 GO:0005515
Pte15g00021 1356 MobiDBLite consensus disorder prediction 815 839 - -
Pte15g00021 1356 Coils Coil 742 783 - -
Pte15g00021 1356 PANTHER MYOSIN 54 92 - -
Pte15g00021 1356 Gene3D - 560 610 - -
Pte15g00021 1356 Gene3D - 659 708 - -
Pte15g00021 1356 Gene3D - 611 658 - -
Pte15g00021 1356 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte15g00021 1356 Gene3D - 493 559 - -
Pte15g00021 1356 FunFam Myosin 2 138 253 - -
Pte15g00021 1356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 611 IPR027417 -
Pte15g00021 1356 PRINTS Myosin heavy chain signature 308 336 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g00021 1356 PRINTS Myosin heavy chain signature 25 50 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g00021 1356 FunFam unconventional myosin-Va 660 707 - -
Pte15g00021 1356 Gene3D - 265 449 - -
Pte15g00021 1356 ProSiteProfiles IQ motif profile. 561 590 IPR000048 GO:0005515
Pte15g00021 1356 Gene3D Kinesin motor domain 249 488 IPR036961 -
Pte15g00021 1356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 709 IPR027417 -
Pte15g00021 1356 ProSiteProfiles IQ motif profile. 609 638 IPR000048 GO:0005515
Pte15g00021 1356 FunFam Class V myosin 265 401 - -
Pte15g00021 1356 Pfam DIL domain 1175 1278 IPR002710 -
Pte15g00021 1356 Coils Coil 843 877 - -
Pte15g00021 1356 ProSiteProfiles IQ motif profile. 680 709 IPR000048 GO:0005515
Pte15g00021 1356 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pte15g00021 1356 SMART DIL_2 1174 1281 IPR002710 -
Pte15g00021 1356 ProSiteProfiles IQ motif profile. 657 685 IPR000048 GO:0005515
Pte15g00021 1356 Gene3D Kinesin motor domain 26 93 IPR036961 -
Pte15g00021 1356 SMART iq_5 560 582 IPR000048 GO:0005515
Pte15g00021 1356 SMART iq_5 608 630 IPR000048 GO:0005515
Pte15g00021 1356 SMART iq_5 656 678 IPR000048 GO:0005515
Pte15g00021 1356 SMART iq_5 631 653 IPR000048 GO:0005515
Pte15g00021 1356 SMART iq_5 679 701 IPR000048 GO:0005515
Pte15g00021 1356 SMART iq_5 583 605 IPR000048 GO:0005515
Pte15g00021 1356 CDD MyosinXI_CBD 937 1322 IPR037975 GO:0007015
Pte15g00021 1356 Gene3D - 95 136 - -
Pte15g00021 1356 Pfam Myosin head (motor domain) 95 546 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g00021 1356 ProSiteProfiles Myosin motor domain profile. 1 558 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pte15g00021 1356 FunFam unconventional myosin-Va 612 659 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00021 Pte-Chr15 216238 228804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00021 1 92 Myosins gene family AT1G54560 75.000 7.10e-41 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00021 K10357 - csav:115718590 2139.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte15g00021 15 216238 228804 Pte15g00021 15 216238 228804 RCT