Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00020 ATGTACGGTCAAAAGCAGCTCGCTAACTTGGGGGTTTCCGGAGCTATGTCTTCCTCCTTTCCTTTTCTCCCAACTCCTTCAGAAGAGAGATACGTTCAGTTGTCAGAATCTTTACAGGCGTCCTCTACTCGTGGTTTGATGACAACTCCTGCCTCTGGGCAATCTTGCACAAATTTTGGAGCGGTTGGACATGTAATTCCATCATCTGCGGGAAAATCCAATGGACATCAATTTCTTCCAGCTTCTCATCATGAAAGGCAGTATCTAAGTCCTCCCTTTATTACTCAGTCCATTGCTGACTCTGTATCATTGCCCCAATCTCATTTCCCTTCGGCAGCATCTACAAGCCAATGCGTGGGAAGTAATATGTCATGGTCTCTTGATTCATTTCCAGACGTTCTTCATTTTCCTCAAAATGTCTCTATCCTTAATAGTCAGTTGGAAAATGATGGAAGTTGTTTTATGATGTCCGAGGACCACACTGAGAAAGCTGATATAGGAGAGTGGGTCGAACAGTTGATCTCAATTGATGATACTTCACAACCTAATTGGGGTCAGATTCTTGGGGACGTTAATGGTGAAGATTCAAAATTAAAGGAGTTGGAACCTGATATCAGTAAGCAGCAGAATCAGGTTCCCCAGCATCAGCTTCAACCATCTGCTGACGCATCCACTGCACAAGCAGCGAAGCCTAGGATGAGATGGACACCAGAACTCCACGAGGCATTCGTTGAAGCTGTCAATCAGCTTGGTGGCAGTGAAACTGACAGCATCAATCAAGGCCGTTTTCCTTCATTCAAATTTTTCGTTTTGTTTCAGAAATACAGAACTGCTAGATTCAAACCTGAGCCATCAGAAGGACCTTCAGAGATAAAGCAGTCATCAATGGAGGAAGTGAAATCTCTAGACATGAAGACGAGTATGAACATCACTGAAGCGTTGCGGTTACAGATAGAACTCCAGAAACGCCTCCATGAACAGTTGGAGATTCAAAGAAAATTGCAGATACAGATAGAAGAGCAAGGGAAGCGTCTGCAGATGATGTTTGAGAAACAGAAAGAGGTGAAGGACGGTGGACCTTCTGCAGATGATGGTCCTGGGGTTTCTAACCCAAATCTTGTTAGATCAGGAGTCAACAATACTGGAGAAGCAAGTAACCTTCCAGAAGAAAGTTCTAGGGATGAAATTGCAACGTGTAGGATAGATGAAACAGTAAAACATGGGCTAGATAACAATGACTCAAGTGTTGCATCAAATAAAAAGCCAAGAGTGGATGAAATCTGA 1284 0.4338 MYGQKQLANLGVSGAMSSSFPFLPTPSEERYVQLSESLQASSTRGLMTTPASGQSCTNFGAVGHVIPSSAGKSNGHQFLPASHHERQYLSPPFITQSIADSVSLPQSHFPSAASTSQCVGSNMSWSLDSFPDVLHFPQNVSILNSQLENDGSCFMMSEDHTEKADIGEWVEQLISIDDTSQPNWGQILGDVNGEDSKLKELEPDISKQQNQVPQHQLQPSADASTAQAAKPRMRWTPELHEAFVEAVNQLGGSETDSINQGRFPSFKFFVLFQKYRTARFKPEPSEGPSEIKQSSMEEVKSLDMKTSMNITEALRLQIELQKRLHEQLEIQRKLQIQIEEQGKRLQMMFEKQKEVKDGGPSADDGPGVSNPNLVRSGVNNTGEASNLPEESSRDEIATCRIDETVKHGLDNNDSSVASNKKPRVDEI* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00020 427 Gene3D - 229 324 - -
Pte15g00020 427 MobiDBLite consensus disorder prediction 352 427 - -
Pte15g00020 427 MobiDBLite consensus disorder prediction 206 225 - -
Pte15g00020 427 MobiDBLite consensus disorder prediction 206 231 - -
Pte15g00020 427 Coils Coil 311 331 - -
Pte15g00020 427 Pfam MYB-CC type transfactor, LHEQLE motif 308 354 IPR025756 -
Pte15g00020 427 MobiDBLite consensus disorder prediction 388 409 - -
Pte15g00020 427 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 273 382 IPR044848 GO:0003700
Pte15g00020 427 MobiDBLite consensus disorder prediction 372 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00020 Pte-Chr15 210554 213827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00020 123 373 G2-like Transcription Factor Family AT3G04450 43.214 3.49e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00020 - - aew:130764257 304.293