Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00015 ATGGGAACTGAGCTCATGAGAATATGTGTTAAAGAAGATAATGATGAGTTTCCATCCGTTCCACCAGGCTTCGAATCATTTTCCTCTTTTTCATTGAAGAGGGTAGAAGGCAATGAAAAAGACGACGAAAACCTGATAACTTGCTCAACTTTGACAAGCATGGAAGTACAATCAGTTAAATCTGAAGCAGATGATCAGGGTGTTAATGATGTTAAGTGCCCGAGGTCTCTTCGAAGGAAACATTGTATTAATCATGGGCGGTTAGATAGAAGTTCAGAGGAAGAGTCTGACTTTGAGCATCATGATCAAAATCTTTCTTCTGTGCCGTGTCTTCCCAAAGGGGTTATTCGAGGATGTCCTGCTTGCAATAATTGCCAGAAGGTTATTGCACATTGGCGACCTGAAAATGCTCGGCGGCCTAATCTGGAGGATGCTCCTGTCTTCTTCCCAACCGAAGAGGAATTTCAAGACACTTTGAGTTTCATATCAAGCATTCGTGAGAGAGCTGAGCCATATGGAGTCTGTAAAATTGTTCCTCCTCCTTCCTGGAAACCTCCTTGTCCTCTCAAGGAGAGGGATATATGGGAGCATTCTAAATTTGCTACTCGTGTCCAGAGGATTGACAAACTCCAAAATCGAGATTCAATGAAGAAGATTTCTAAGACACGTAATAATACAAGGAGGAAAAGAAAAAGGTGTGCAAGAATGGAGGTTGATTATGGAAATACTGGAGCATCTGATGTTGAAAAAATTGAGGTTGAAAGTTTTGGATTTGAACCTGGTCAGGAGTTTACCTTAGGAACATTCCAGAGATATGCAGATGACTTCAAGGCTAGATATTTTAGAAAGAATGAAAACTTGTCCAGTATTGTAGATAATGAAACGAGACCTGAAGATTCCTGGGAGCCCTCTGTGGAGAATCTTGAAGGTGAATACTGGAGAATGGTAGAGAGACCTACAGAAGAGATAGAGGTTCTTTATGGGGCAGATCTGGAAACTGGGATTTTTGGTAGTGGTTTCCCTAAGCAGTCTGGTGAGCTTACTTCCGCTTCGGATGAAAAGTACTTAAAATCAGGCTGGAATTTGAACAACTTCCCCAGGCTTAGTGGATCGGTGCTCTCTTATGAAAGCAGTGATATCTCTGGTGTTTTAGTACCGTGGCTTTACATAGGGATGTGTTTTTCATCATTTTGCTGGCATGTTGAAGACCATCATTTGTATTCACTTAACTATATGCATTGGGGTGCTCCAAAAATGTGGTATGGTGTCCCTGGGAAGGAGGCCTCAAAATTGGAGGAGGTTATGAAAAAGCATTTACCCGACCTTTTTGAAGAACAACCTGACTTGCTTCATAAGCTGGTTACTCAGCTCTCCCCATCCATTTTAAAATCTGATGGGGTTCCTGTCTATAGGTGTGTCCAAAATGCTGGAGAGTTTGTGCTGACCTTCCCCAGGGCATATCATTCGGGATTCAACTGTGGCTTCAACTGTGCTGAGGCAGTCAATGTTGCACCAGTTGATTGGCTGCCGTATGGGCAGATTGCGATTGAGCTTTATCGGGAACAGGGCCGCAGGACATCTATATCCCATGATAAACTGTTGCTTGGGGCTGCGCGGGATGCAGTTAGAGCACACTGGGAGCTTAATTTACTGAAGAAGAATACTTTAGATAACTTACGATGGAAAGATTTCTGTGGAAAAGATGGAATTTTAGCAAAAGCACTCAAGTCTCGTGTTGAGATGGAACGTGTAAGTAGGGAATCTCTTTGCAGTTATTCACAGGCTCTGAAGATGGACAGCAGCTTTGATGCCAACAATGAAAGGGAATGCAGCGTCTGTCTCTTTGATTTACACCTTTCAGCTGTGGGATGTCACTGTTGTCCAGATCGATATGCCTGCTTAAATCACGCAAAACAATTCTGCTCATGTGCTTGGGATTCCAAATTTTTCCTTTTCCGTTATGATATCAGTGAGTTAAATATTCTAGTTGATGCTTTGGAAGGAAAACTAAGTTCTGTTTACCGGTGGGCAAGATTAGATCTTGGACTGGCGCTGACTTCCTATGTCTCCAAAGACCATATGCAATTTGGTACTTTGTCTCAATCTTCTAAAAAAATTACAGTTGAAGAATTGAGGTCTAGAGGTTCAGTGTTGAGACCCACGGTCCGGAAAGAGGTCTCCTTGCAACGTTCTAGTATATCCATCAAAGATCATCAACAGATGCATGTCTCAATCAAACCTGACGCAAGCTCTAGTTGTCAAGTAGAAGTTTTGTCAGCCGTTAAGAATGAAAAAGCATTAACCTCTCCTAGTTCATCAGCTGTCATTCCTAACCAAGCTAAGAAAGAAGAATCAGCTGGTCTCAGTTCTAACTTGAGACCAGTTTGCCAGCTTTCCCTGGAACACACATCCTATTCTTTATCTCCTGCTGCAGAAGAGCCTGAATCTAAAAAGGCTCCTGGTTCTGGAAGTGATAATATTATACTTGTTAGTGATGATGAAGGAGATGAGGAACCAAATTTGTCAGAGTCTGATAAAAAGATGGCACTTACTGAGAAACTTGATGACAACTCATGGAAGAAAGAAGAAAAGCCAATCTTAACTGCCCCTGTTGTAAAAGCAGTGTTAATGGTTGAAAATGATTCCGTTCCTGATGAAAAAATAAATTCTCCTTTAACTGATCCTTCAAATAAGGAGGTGCATATAGGAATCTCTCAACCAGATCTTCCAGGCAACTTTGGATGTACAGTTGCAGAACCTGACAATAACGGCTTAACAAAAGAACATAATTGTAGAACGGATAACTCTGATAAATGTCCTCAGAATGCACTGCAATCTAGCTGCATCAAGCCTTCATTGGAGGACAAGAACGAAATTTTGGGAGTTTGTGTCAATTCAAATTCAGCAGAGAACACAATTAATGCAAATGCTTCGAGCTATAATAATGCAGAAAGGAATCATCGTCAGGGTCTTCGTATTGCAAAAGTAATTCGCCGGATCAACCGCACTGTTGAGCCTCTTGAATATGGGATTGTGCTTTCTGGAAGGTCATGGTGCAACAGCCAGGCTATATTTCCAAGAGGGTTTAGAAGTCGAGTTCGTTACACTAGTGTTTTAGATCCAACGAAGATGTGTTATTATATATCAGAAATTGTTGAGGCTCAAAGCTCTGGGCCTTTGTTCATGGTTTCTGTGGAGAATTGCCCAAGTGAGGTCTTCGTCCATATTTCAGCTTCGCGATGCTGGGACATGGTTAGAGAAAGGTTGAACCAAGAGATTGCGAAGCAATATAGATTGGGAAGGGTAAACCTTCCTCCTTTGCTGCCACCTGGCAGTGTTGATGGTTTTGAGATGTTTGGGTTTTCATCCCCGGCAATTGTACAGACTATCGAGGCAATGGATCGAAATCGAGTGTGTACTGAATATTGGGGTTCCCGGCCTTACTCTCGCCCTCCATTGCAGATTCTACATAGTTCTTCTCAATCTACGGAAAATGGTAAAGATTTCCATGGAAACCAGCCCTTGTCTAGTGGGTCGAATGAGGTGCTAAGGGGATTATTTAGAAAAGCAGACCAAGAAGAATTGAACTCCTTGCACAGCTTTCTCACTGATAATAAGTTGCCTGAAGTTCAAAGAGTGATCATGCAACTACTACAGGAAGAAATTCACAACCGGGGGAAATGA 3684 0.421 MGTELMRICVKEDNDEFPSVPPGFESFSSFSLKRVEGNEKDDENLITCSTLTSMEVQSVKSEADDQGVNDVKCPRSLRRKHCINHGRLDRSSEEESDFEHHDQNLSSVPCLPKGVIRGCPACNNCQKVIAHWRPENARRPNLEDAPVFFPTEEEFQDTLSFISSIRERAEPYGVCKIVPPPSWKPPCPLKERDIWEHSKFATRVQRIDKLQNRDSMKKISKTRNNTRRKRKRCARMEVDYGNTGASDVEKIEVESFGFEPGQEFTLGTFQRYADDFKARYFRKNENLSSIVDNETRPEDSWEPSVENLEGEYWRMVERPTEEIEVLYGADLETGIFGSGFPKQSGELTSASDEKYLKSGWNLNNFPRLSGSVLSYESSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKMWYGVPGKEASKLEEVMKKHLPDLFEEQPDLLHKLVTQLSPSILKSDGVPVYRCVQNAGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLPYGQIAIELYREQGRRTSISHDKLLLGAARDAVRAHWELNLLKKNTLDNLRWKDFCGKDGILAKALKSRVEMERVSRESLCSYSQALKMDSSFDANNERECSVCLFDLHLSAVGCHCCPDRYACLNHAKQFCSCAWDSKFFLFRYDISELNILVDALEGKLSSVYRWARLDLGLALTSYVSKDHMQFGTLSQSSKKITVEELRSRGSVLRPTVRKEVSLQRSSISIKDHQQMHVSIKPDASSSCQVEVLSAVKNEKALTSPSSSAVIPNQAKKEESAGLSSNLRPVCQLSLEHTSYSLSPAAEEPESKKAPGSGSDNIILVSDDEGDEEPNLSESDKKMALTEKLDDNSWKKEEKPILTAPVVKAVLMVENDSVPDEKINSPLTDPSNKEVHIGISQPDLPGNFGCTVAEPDNNGLTKEHNCRTDNSDKCPQNALQSSCIKPSLEDKNEILGVCVNSNSAENTINANASSYNNAERNHRQGLRIAKVIRRINRTVEPLEYGIVLSGRSWCNSQAIFPRGFRSRVRYTSVLDPTKMCYYISEIVEAQSSGPLFMVSVENCPSEVFVHISASRCWDMVRERLNQEIAKQYRLGRVNLPPLLPPGSVDGFEMFGFSSPAIVQTIEAMDRNRVCTEYWGSRPYSRPPLQILHSSSQSTENGKDFHGNQPLSSGSNEVLRGLFRKADQEELNSLHSFLTDNKLPEVQRVIMQLLQEEIHNRGK* 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00015 1227 Gene3D - 1003 1140 - -
Pte15g00015 1227 MobiDBLite consensus disorder prediction 807 849 - -
Pte15g00015 1227 SMART JmjN_1 144 185 IPR003349 -
Pte15g00015 1227 SUPERFAMILY Clavaminate synthase-like 355 547 - -
Pte15g00015 1227 PANTHER LYSINE-SPECIFIC DEMETHYLASE 138 1134 - -
Pte15g00015 1227 SMART fyrn_3 1010 1054 IPR003888 GO:0005634
Pte15g00015 1227 Pfam F/Y rich C-terminus 1058 1142 IPR003889 GO:0005634
Pte15g00015 1227 ProSiteProfiles FYR domain FYRC motif profile. 1056 1146 IPR003889 GO:0005634
Pte15g00015 1227 FunFam Putative lysine-specific demethylase JMJ16 1002 1140 - -
Pte15g00015 1227 Pfam JmjC domain, hydroxylase 387 503 IPR003347 -
Pte15g00015 1227 MobiDBLite consensus disorder prediction 1154 1178 - -
Pte15g00015 1227 ProSiteProfiles JmjC domain profile. 354 520 IPR003347 -
Pte15g00015 1227 Gene3D Cupin 130 504 - -
Pte15g00015 1227 SMART cupin_9 354 520 IPR003347 -
Pte15g00015 1227 Pfam F/Y-rich N-terminus 1010 1051 IPR003888 GO:0005634
Pte15g00015 1227 Pfam C5HC2 zinc finger 610 660 IPR004198 -
Pte15g00015 1227 Pfam jmjN domain 146 179 IPR003349 -
Pte15g00015 1227 MobiDBLite consensus disorder prediction 768 789 - -
Pte15g00015 1227 ProSiteProfiles JmjN domain profile. 145 186 IPR003349 -
Pte15g00015 1227 SMART fyrc_3 1060 1154 IPR003889 GO:0005634
Pte15g00015 1227 ProSiteProfiles FYR domain FYRN motif profile. 996 1054 IPR003888 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00015 Pte-Chr15 178626 186515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00015 1 1225 JUMONJI Transcription Factor Family AT1G08620 53.160 0.0 1200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pte15g00015 JmjC 7.9e-47 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00015 K11446 - qsa:O6P43_007681 1510.35