Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00012 ATGTCTGACACCCTTAAGAACAAATACCAGCTTTGCCAAGAGATCGGCCGGGGTCGGTTTGGTACCATCTATCGCTGTTACCATCCTGCTTCCAACCACTTCTACGCATGTAAAGTCATCGACAAGCGTCTTCTCACCGATTCTACTGACCGTCAATGTCTTGAGAATGAATCTAAATTCATGACCCTTTTGTCTCCTCATCCGAATATTGTACAGATCATGGATGTGTTTGAAAACGATAATTTCTTGTCTATGGTCGTGGAGCTCTGTCAGCAGGTAACCTTGTTCGACCTCATTGTCAACTCTCCCTTCAAAGAGACCCAAGCCGCCTCTTGGGTGAAGCAGATTCTCCAAGCTTTAGCACATTGTCACCGACTCGGCGTAGCTCACAGAGATATGAAGCCTGAAAACGTTTTGTTCGATTCCAGGGACAATCTTAAACTTGCCGATTTTGGGTCCGCGGAATGGTTTGGTGAGAACAGATGTATGAGTGGAATCGTGGGTACACCCTACTATGTGGCACCGGAGGTTTTGTTGGGTAGAGATTACAACGAGAAGGTAGATATGTGGAGCTGTGGCGTGATCATGTATATCATGTTGTCTGGGACTCCACCCTTTTATGGAGACTCGGCAGCCGAGATTTTTGAGGCTGTTTTGAAGGGTCATCTCAGGTTTCCCACCAGGGTGTTTAGGTCGGTGTCTCCTGCTGCCAAGGACTTGTTGAGGAGGATGATCTGCAGAGACGTGTCCAGGCGATTCTCAGCAGATCAAGCCTTGAGTAAAGTTTCTCAAAAACTCTTCTCCATACTCTTGCCACTCTGCCTTTGTTCTATAATATGCAAAGTCATTCCTGCTGTGAACGCGATCCAAATTTTCTGA 879 0.4664 MSDTLKNKYQLCQEIGRGRFGTIYRCYHPASNHFYACKVIDKRLLTDSTDRQCLENESKFMTLLSPHPNIVQIMDVFENDNFLSMVVELCQQVTLFDLIVNSPFKETQAASWVKQILQALAHCHRLGVAHRDMKPENVLFDSRDNLKLADFGSAEWFGENRCMSGIVGTPYYVAPEVLLGRDYNEKVDMWSCGVIMYIMLSGTPPFYGDSAAEIFEAVLKGHLRFPTRVFRSVSPAAKDLLRRMICRDVSRRFSADQALSKVSQKLFSILLPLCLCSIICKVIPAVNAIQIF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00012 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Pte15g00012 292 CDD STKc_CAMK 8 260 - -
Pte15g00012 292 Pfam Protein kinase domain 9 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00012 292 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte15g00012 292 FunFam Maternal embryonic leucine zipper kinase 1 265 - -
Pte15g00012 292 ProSiteProfiles Protein kinase domain profile. 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00012 292 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Pte15g00012 292 SMART serkin_6 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte15g00012 292 FunFam Phosphoenolpyruvate carboxylase kinase 1 1 91 - -
Pte15g00012 292 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 260 - -
Pte15g00012 292 SUPERFAMILY Protein kinase-like (PK-like) 5 260 IPR011009 -
Pte15g00012 292 Gene3D Transferase(Phosphotransferase) domain 1 93 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00012 Pte-Chr15 162239 165111 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00012 9 259 EF-hand Containing Proteins AT3G20410 42.745 2.65e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte15g00012 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00012 - K08794 qsa:O6P43_007686 444.891