Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00009 ATGGACCAAGCAGTTCTTGATGACATAATCAATCGATTACTTGAGGTCCGGAGCCGACCCGGGAAACAGGTCCAGTTGTCTGAGTCGGAGATCCGCCAACTTTGTTTAGTTTCCAAAGATATCTTCTTGCAGCAGCCTTATTTGTTAGAGCTGGAAGCCCCCATTAAGATTTGTGGTGATGTACATGGTCAGTATTCTGATCTTTTGAGGCTTTTTGAGTATGGTGGTTTACCTCCCAAAGCAAACTATCTGTTTCTGGGTGATTATGTTGACCGAGGAAAACAGAGCTTAGAAACAATATGTCTTCTTCTAGCATACAAAATTAAATATCCTGAGAACTTTTTTGTTTTGAGGGGGAACCATGAATGTGCTTCTATAAACCGTATATATGGATTCTATGATGAGTGTAAGAGAAGGTTCAACGTAAGATTGTGGAAGATATTCACTGATTGCTTTAACTGCCTGCCAGTTGCTGCACTAATTGATGAAAAGATCCTGTGTATGCATGGGGGACTTTCTCCAGAGTTGCAAAGTTTGGATCAGATTAGAAATCTACAGCGTCCTACTGATGTACCTGATACGGGTTTGCTTTGTGATCTTCTTTGGTCAGATCCAAGTAAAGATGTTCAAGGTTGGGGGATGAATGATAGGGGAGTTTCATATACATTTGGTCCCGATATCGTGTCAGGGTTTCTGCAAAAGCATGACTTGGATCTCATTTGTCGTGCACATCAGGTTGTGGAGGATGGATATGAATTCTTTGCAAACAGGCAGCTTGTAACCATATTTTCAGCACCTAATTATTGTGGGGAGTTTGATAATGCTGGTGCTATGATGAGTGTGGATGAGACATTGATGTGCTCTTTCCAAATATTGAAACCTGCTGACAAAAGAAATAAGCTCACCTTTAGTAGCACAACCACAGCGAAGCCTGGAAATTCGCTGACAGGTATTCCTGGCAGTACTATGACAACTAAAAATGGGAACTCTCCTGCAGGAGTTAAGTCCTTCATGGGTGCAGAAGTATGA 1029 0.4169 MDQAVLDDIINRLLEVRSRPGKQVQLSESEIRQLCLVSKDIFLQQPYLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPKANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFVLRGNHECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELQSLDQIRNLQRPTDVPDTGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGPDIVSGFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKRNKLTFSSTTTAKPGNSLTGIPGSTMTTKNGNSPAGVKSFMGAEV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00009 342 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Pte15g00009 342 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pte15g00009 342 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Pte15g00009 342 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Pte15g00009 342 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Pte15g00009 342 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Pte15g00009 342 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Pte15g00009 342 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Pte15g00009 342 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Pte15g00009 342 SMART pp2a_7 26 296 IPR006186 GO:0016787
Pte15g00009 342 MobiDBLite consensus disorder prediction 305 331 - -
Pte15g00009 342 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Pte15g00009 342 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 300 - -
Pte15g00009 342 Gene3D - 1 305 IPR029052 -
Pte15g00009 342 CDD MPP_PP1_PPKL 5 294 - -
Pte15g00009 342 SUPERFAMILY Metallo-dependent phosphatases 16 301 IPR029052 -
Pte15g00009 342 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00009 Pte-Chr15 149920 153928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00009 55 239 Calmodulin-binding Proteins AT5G63870 33.032 9.41e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00009 K06269 - tcc:18600080 639.802