Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00007 ATGGGACAGCTAACGTCCTTCTTCCCGTCCAAAACCCTAGTAGTCGTACGATTGATATGCGCCTATATAAACCTTCTCTGGCTTAAACCCTATCGGGACACATTGACAAGCGTCGGCTCACTTTCGAAGTTGAAGGTCAAAGTTGGCAAAATGTCAAACCCAAGGGTGTTCTTTGATATTTTGATTGGAAAGGCGAAAGCAGGGCGCATAGTGATGGAGCTTTTTTCAGACGTAACCCCAAAGACTGCTGAGAATTTCCGCGCGCTTTGTACTGGAGAGAAGGGAATGGGTATATCTGGTAAACGGCTGCACTACAAAGGATCTACATTTCACCGCGTCATCCCAAATTTCATGTGCCAAGGGGGAGATTTTACCAGGGGAAATGGAACTGGGGGAGAGTCTATTTATGGTGCCAAGTTTGCTGACGAGAACTTCATGCTTCGACACACGGGGCCTGGTATTTTGTCAATGGCAAATGCCGGACCCAACACAAATGGTTCCCAGTTCTTTATCTGCACTGAGAAAACATCATGGCTTGACGGGAAGCATGTTGTATTTGGAAAGGTTGTTGATGGGTACAGTGTGGTCAAAGCCATGGAAAATGTTGGCTCTCCTTCTGGGCAGACTTCAGAAACTGTTACCATAGAAGATTGTGGTCAGGTAACTGTGAATCCACATTCCTAG 684 0.4635 MGQLTSFFPSKTLVVVRLICAYINLLWLKPYRDTLTSVGSLSKLKVKVGKMSNPRVFFDILIGKAKAGRIVMELFSDVTPKTAENFRALCTGEKGMGISGKRLHYKGSTFHRVIPNFMCQGGDFTRGNGTGGESIYGAKFADENFMLRHTGPGILSMANAGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYSVVKAMENVGSPSGQTSETVTIEDCGQVTVNPHS* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00007 227 Gene3D - 43 225 IPR029000 -
Pte15g00007 227 SUPERFAMILY Cyclophilin-like 50 221 IPR029000 -
Pte15g00007 227 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 105 122 IPR020892 GO:0003755|GO:0006457
Pte15g00007 227 CDD cyclophilin_ABH_like 54 219 - -
Pte15g00007 227 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 64 219 IPR002130 GO:0000413|GO:0003755
Pte15g00007 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 74 89 IPR002130 GO:0000413|GO:0003755
Pte15g00007 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 122 IPR002130 GO:0000413|GO:0003755
Pte15g00007 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 181 196 IPR002130 GO:0000413|GO:0003755
Pte15g00007 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 168 180 IPR002130 GO:0000413|GO:0003755
Pte15g00007 227 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 168 IPR002130 GO:0000413|GO:0003755
Pte15g00007 227 FunFam Peptidyl-prolyl cis-trans isomerase 50 222 - -
Pte15g00007 227 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 55 220 - -
Pte15g00007 227 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 57 220 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte15g00007 Pte-Chr15 138103 139962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00007 68 227 U-box Gene Family AT5G67530 46.296 2.99e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00007 K01802 - csin:114310748 318.546