Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte15g00006 ATGCTGAAACTCGCGCGCCTACTGCGTTCCACTTCCAGTTCCAGGCATCCATTTTCTGAATCACTTTCATATGGGCGATCGGGTTTTAAGGATAGCTTATTCCATCCCAGTTGGTCCGTTTCTTCTGCTGGAATTTCCACTTCAACGGGATACTCCAGAGACCGTATATTCGCTCCATTTTCCATCTTCAAGGGCAAAGCTGCCCTCTACTTGAGTCCTCTTCTGCCAACTTTTACCAAGTTGGAGTCTGGAGCAGCTGTAGTTGATCGTCGTGGGTCAGTGATGATGAGCTTCTTGCCTGCAGTTGGTGAGCGTAAATATGACAGTCAAAAGAAGCAAGTCTTTGCCCTTTCGGCTACAGAGCTTGGATCTTTGATAAGCTTGGGTCCAAAAGAATCATGCGAGTTTTTCCATGACCCTTCAATGAAGGGCAGTTTTGGGTATTTGCAATGCAACGCTGGCCAAGTAAGGAAAAGCCTATCTATTAAGCCTCATACAGATGGTAGTGGATATTTTATCTCATTGACTGTGGTGAACAACGTCCTAAAATCAAGAGATACTTTTACTGTTCCTGTCACAACTGCCGAGTTTGCAGTAATGAAGACAGCTTGCAGTTTTGCCCTCCCACATATTATGGGTTGGGATCGCATGACTCAGCAGCAACCTAGAGATGCTGACAGGCAGCCATCCAAAACTGACCCACAGCTTATTGAACTAGAGTGGGAGAAATGA 732 0.4577 MLKLARLLRSTSSSRHPFSESLSYGRSGFKDSLFHPSWSVSSAGISTSTGYSRDRIFAPFSIFKGKAALYLSPLLPTFTKLESGAAVVDRRGSVMMSFLPAVGERKYDSQKKQVFALSATELGSLISLGPKESCEFFHDPSMKGSFGYLQCNAGQVRKSLSIKPHTDGSGYFISLTVVNNVLKSRDTFTVPVTTAEFAVMKTACSFALPHIMGWDRMTQQQPRDADRQPSKTDPQLIELEWEK* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte15g00006 243 MobiDBLite consensus disorder prediction 220 243 - -
Pte15g00006 243 SUPERFAMILY ssDNA-binding transcriptional regulator domain 54 242 IPR009044 GO:0003677|GO:0006355
Pte15g00006 243 Gene3D Transcriptional Coactivator Pc4; Chain A 47 226 IPR009044 GO:0003677|GO:0006355
Pte15g00006 243 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 43 243 IPR013742 GO:0003697|GO:0006355|GO:0006952
Pte15g00006 243 MobiDBLite consensus disorder prediction 218 243 - -
Pte15g00006 243 Pfam Whirly transcription factor 62 202 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte15g00006 55 244 Whirly Transcription Factor Family AT1G71260 67.010 4.34e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Pte15g00006 Whirly 4.2e-52 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte15g00006 K26561 - jre:109001388 298.901