Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01317 ATGAAGCATCCAAAACTGGTCCGAGTGTTTGTAACAGACGAGGATGCCACTGACTCATCGAGTGATGAAGAATGCGAGGTACTCCCTCGCCAACGAGTCAGAACATTTATGAATGAGATTAGAATCAAGGCATGTAGAAACCCAAACCTAAACAAGAGCCTCTCACAAAGAAAGGTTGTCAAGTCTAGTAATGGCGGGAACAAGGTGAAGTCTGTTAGTTGCAAAGGTCCTACGCCGGTGAATAACCGACAGATGAAGCTGCAATCAGGAAAGAAGTTCCGGGGTGTAAGGCAGAGACCATGGGGAAAATGGGCAGTCGAGATCAAAGAACCCCTGCGACGTGTACGGTTGTGGCTTGGTACTTACGATACGGCGGAAGAGGCAACCATGATGTACGATAACGTGGCTATTCAGCTGCGTGGACAGGATGCGCTCACCAACTTTGTCACACCATCATCCCAAAACACAGCTGAAATTCACGTTAAGTCAAGAGTTAAGGTGGATTTCAACTCGGGCAAGGAAAAGGATCACAACAACGTCGTTTGCTCCCCAATATCTATACTGTAG 567 0.4727 MKHPKLVRVFVTDEDATDSSSDEECEVLPRQRVRTFMNEIRIKACRNPNLNKSLSQRKVVKSSNGGNKVKSVSCKGPTPVNNRQMKLQSGKKFRGVRQRPWGKWAVEIKEPLRRVRLWLGTYDTAEEATMMYDNVAIQLRGQDALTNFVTPSSQNTAEIHVKSRVKVDFNSGKEKDHNNVVCSPISIL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01317 188 CDD AP2 91 148 IPR001471 GO:0003700|GO:0006355
Pte14g01317 188 ProSiteProfiles AP2/ERF domain profile. 92 149 IPR001471 GO:0003700|GO:0006355
Pte14g01317 188 Pfam AP2 domain 92 141 IPR001471 GO:0003700|GO:0006355
Pte14g01317 188 Gene3D AP2/ERF domain 91 150 IPR036955 GO:0003700|GO:0006355
Pte14g01317 188 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 158 - -
Pte14g01317 188 PIRSF PTI6 2 188 IPR017392 GO:0003700
Pte14g01317 188 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Pte14g01317 188 PRINTS Ethylene responsive element binding protein signature 93 104 IPR001471 GO:0003700|GO:0006355
Pte14g01317 188 SUPERFAMILY DNA-binding domain 92 149 IPR016177 GO:0003677
Pte14g01317 188 MobiDBLite consensus disorder prediction 57 80 - -
Pte14g01317 188 SMART rav1_2 92 155 IPR001471 GO:0003700|GO:0006355
Pte14g01317 188 FunFam Ethylene-responsive transcription factor 2 91 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01317 Pte-Chr14 34317745 34318311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01317 5 188 AP2-EREBP Transcription Factor Family AT4G27950 44.865 8.15e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte14g01317 AP2 5.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01317 - - qsa:O6P43_034311 208.764