Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01298 ATGGGGCATCACTCTTGCTGCAACCAACAAAAGGTCAAGAGAGGACTTTGGTCCCCCGAGGAAGATGAGAAGCTCGTCAGATATATTACCACCCATGGATATGGCTGCTGGAGCGAAGTTCCGGAGAAAGCTGGGCTGCAAAGGTGTGGGAAGAGTTGTCGTCTAAGATGGATTAATTATCTGAGACCTGATATTAGAAGAGGCAGATTTACTCCAGAAGAAGAGAAATTAATTATAAGTCTTCATGGGGTAGTAGGGAACAGATGGGCTCATATCGCAAGTCATTTGCCTGGAAGAACAGATAACGAGATAAAGAATTACTGGAATTCCTGGATAAAGAAGAAGATCAAGAAGGCTACAGCACCTTCATCCACCATTACACAAAGTGCTGCACATCCCCACTTAAGTTATAATCCTAACCGACTAGACGTAATTGCAAATCAAGACCTAAATTCGAAGTCAGCCATCCAAGAAACCATGTTTTCATCTCCTTGCCCCCTCTTTATGTTCGACACTTGTTCAATGGAAGGGACAACAGCAGATCATAACGCACGCGGAGACTTCTTTCAGGATGATGTGGGTTTGTGCTCTGAAACGTGGAACTTAAACCAGCAGGATCAAGCCCAAGCTGCCCTTCACATACCGACATCAACTATTAGTTTCTCTACTGTAAATATGGATACTAGTTACTTGCCACCCTTGATAGAAAACGTGGAACCCGTGGTTCCTATTGGAGTGCAGTCTTGTAGCGTGGATGAACATGGTGGCAGTGCATTGGAGTGCCTACAAAGGCAGCATGAGTTGAGTGAATGGGTTGAATCTCAGCAGCAATGTCAACATTATCTATTCTGGGACAATGTAGAAGGACAACTTCGAGCGGAGGAAATTGCACCAAATTTGGACAACATGGGATCTAATGGTTTTTCTTGTTTTCCTTCAACTTCATAA 948 0.4388 MGHHSCCNQQKVKRGLWSPEEDEKLVRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPEEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIKKATAPSSTITQSAAHPHLSYNPNRLDVIANQDLNSKSAIQETMFSSPCPLFMFDTCSMEGTTADHNARGDFFQDDVGLCSETWNLNQQDQAQAALHIPTSTISFSTVNMDTSYLPPLIENVEPVVPIGVQSCSVDEHGGSALECLQRQHELSEWVESQQQCQHYLFWDNVEGQLRAEEIAPNLDNMGSNGFSCFPSTS* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01298 315 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pte14g01298 315 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pte14g01298 315 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pte14g01298 315 FunFam Transcription factor MYB26 68 137 - -
Pte14g01298 315 FunFam MYB transcription factor 6 66 - -
Pte14g01298 315 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pte14g01298 315 SMART sant 66 114 IPR001005 -
Pte14g01298 315 SMART sant 13 63 IPR001005 -
Pte14g01298 315 CDD SANT 17 61 IPR001005 -
Pte14g01298 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pte14g01298 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pte14g01298 315 CDD SANT 69 111 IPR001005 -
Pte14g01298 315 Gene3D - 6 66 - -
Pte14g01298 315 PANTHER MYB DOMAIN PROTEIN 55 1 201 - -
Pte14g01298 315 Gene3D - 68 135 - -
Pte14g01298 315 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01298 Pte-Chr14 34138523 34140653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01298 1 301 MYB Transcription Factor Family AT1G63910 50.975 2.88e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte14g01298 Myb_DNA-binding 6.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01298 K09422 K02947 cave:132175206 443.736