Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01293 ATGGGTTTTCCGGTAGGCTGCACTGAGGTCATTCTCCCAAAGCTCTGCGTTCACGCTCTTTGGCTTCTGGGTTTTATCAGAAAATTGATCTCTGTCTTGTTTAGTTATTTGGGTCTCCAAGATTTTCTCGAATCAGACGTTGTATGGTCGGACCAACCGACCCGAATACCCGAATTCCAGTCAGTTTCCGCCCTCCTGATCTGCGAACTCCTGCCCGTCGTGAACTTCTCCGAGCTAGTAGACCCACCTGAGAGCTGTGCCGTTTGCCTCTACGAATTCGAGGCTGACGACGAGATCAGACAGCTGACGAACTGCCGTCACATCTTCCATCGGGACTGCCTGGACCGTTGGATGGGTTACGATCAAAGAACGTGCCCTCTTTGCAGGACCTCATTCATACCTGAAGATATGCAAGGAGCTTTCAACGAGAGGCTCTGGGAAGCCTCTGGTATTCCTGAATTTTACGGAGAATTTTCTCACATCACAAACGGTTTTTAG 498 0.498 MGFPVGCTEVILPKLCVHALWLLGFIRKLISVLFSYLGLQDFLESDVVWSDQPTRIPEFQSVSALLICELLPVVNFSELVDPPESCAVCLYEFEADDEIRQLTNCRHIFHRDCLDRWMGYDQRTCPLCRTSFIPEDMQGAFNERLWEASGIPEFYGEFSHITNGF* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01293 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 132 IPR013083 -
Pte14g01293 165 SUPERFAMILY RING/U-box 68 135 - -
Pte14g01293 165 Pfam Ring finger domain 85 129 IPR001841 -
Pte14g01293 165 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Pte14g01293 165 PANTHER RING ZINC FINGER PROTEIN-RELATED 22 146 - -
Pte14g01293 165 SMART ring_2 86 128 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01293 Pte-Chr14 34080018 34081954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01293 1 150 C3H Transcription Factor Family AT1G63840 58.710 6.31e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01293 K16281 - fve:101313016 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01293 14 34080018 34081954 Pte14g01293 14 34080018 34081954 RCT