Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01290 ATGCTGGTTCGAAAGCTTGACCCTGCGAAGGAATCAGAAATTGAACTTTCAAAATCAGCCGAATTTATTATTGAAGAGGAGGATGCGTGTCCAATTTGTTTGGATGAGTATGATAAAGAGAATCCAAAGTTCACTCCAAAATGTGAGAATCATTTTCACCTAGCCTGCATTCTCGAATGGATGGAAAGAAGTGAAACACGTCCCGTTTGCGATAAGCTTAAGAAGGATAAGCTGGCGGTGAAAAGTTTGCTCGTATCTGGTGGAAGTGTTGTATTCCTGGGTTCAAGAAGTGGACTTCTAAAGTCGTATGTAGTAGCTAAAACCACAGGAGGCATTCCAGACCATAGCAGTCAAGATCGCGATCCGGATCTGAAAGATCTGAAAGATCGCGATCCTGATGAGTGCAAACGATCCTACTGCAATCAAAGATCGTGA 435 0.4276 MLVRKLDPAKESEIELSKSAEFIIEEEDACPICLDEYDKENPKFTPKCENHFHLACILEWMERSETRPVCDKLKKDKLAVKSLLVSGGSVVFLGSRSGLLKSYVVAKTTGGIPDHSSQDRDPDLKDLKDRDPDECKRSYCNQRS* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01290 144 ProSiteProfiles Zinc finger RING-type profile. 30 71 IPR001841 -
Pte14g01290 144 MobiDBLite consensus disorder prediction 114 144 - -
Pte14g01290 144 Pfam Ring finger domain 29 70 IPR001841 -
Pte14g01290 144 MobiDBLite consensus disorder prediction 109 144 - -
Pte14g01290 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 78 IPR013083 -
Pte14g01290 144 SMART ring_2 30 70 IPR001841 -
Pte14g01290 144 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 18 73 - -
Pte14g01290 144 SUPERFAMILY RING/U-box 20 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01290 Pte-Chr14 34042073 34043389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01290 6 72 C3H Transcription Factor Family AT5G41350 64.179 2.02e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01290 - - qsa:O6P43_024156 117.087