Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01273 ATGCTAATGGGGAAAGGTAGAACTAGGGCTGTGGAAAAAGGTGTAGTGGGACAAAGTGGGAGTGGTGTATTATCTGGATCATTGAATAATATACCATCAGGTCCTGTGTATTACCCTACTGAGGATGAATTTGAGGACCCTTTGGAATTTATTTATAAGGTTAGACCGGAGGCTGAGCCGTATGGAATTTGTAGGATTGTTCCACCAAAGAATTGGAAACCCCCATTTGCTTTGGATTTAGATTCTTTCAGTTTCCCTACCAAGACGCAGGCCATTCATCAATTGCAGGCTCGTCCTGCTGCTTGTGATTCCAAAACTTTTGACTTGGAGTACAATAGGTTTCTGGAGAAAACCTGTGGTAAGAAAGCAAAGAAGAGGGTTTGTTTTGAAGGGGATGATTTAGATTTCTGTAGATTGTTTAATGCAGTTAAGCGGTATGGAGGGTATGACGAGGTTGTTAAGAGAAAGAAGTGGGGGGAGGTTGCTAAGATTTTGAAGCCGGGAAGGAAGGTTTCAGACTGTGGAAAACATGTGCTGTCTCTATTGTACTTAGAACATTTGTATGATTATGAGAATTATTACAATGGATTGAATATAGATTCTACGAAGAGTTTCAAGAAAGGTGTCTATTATGAGAGGACAAATCAACAAAGGGATGAATTCTCAGCTTCCAAGAGGAGGAATAAGAATAATGAGGGTGTGGGAGTCAAGGAGGAAGAGCATGATCAGATTTGTGAACAATGCAAAAGTGGGTTGCATGGCGAAGTGATGCTATTATGTGACAGGTGTGATAAAGGTTGGCATATTTATTGCCTTTCCCCACCGTTGAAGCACGTACCTCCCGGTAACTGGTATTGCTTTGAGTGTTTAAACTCTGATAAGGATAGCTTTGGGTTTGTGCCTGGCAAGCATTATACACTAGAAGCTTTTAGGCGTGTGGCTGATCGGTTTCGGAAGAAATGGGTTGGATCAGGATCTGTTTCACGTGTGCAAGTTGAGAGAAAATTTTGGGAAATTGTTGATGGATCACTTGGTGAAGTTGAAGTTATGTACGGAAGTGACTTGGATACATCTCAACTTGGAAGTGGTTTTCCACGCACACATGATCAGAGACCGCAATCAATTGATGCAAAGATATGGAATGAGTATTGTAGTAGCCCATGGAATCTGAACAACTTGCCCAAATTGAAAGGGTCAGTGCTCCAAGCTGTGCATCACAATATTACTGGGGTTATGGTGCCATGGTTGTATATTGGAATGCTATTCTCATCATTTTGCTGGCATTTTGAAGATCATTGTTTTTACTCTATGAACTATCTACACTGGGGCGAGCCAAAGTGTTGGTACAGCATTCCTGGCAGTCAAGCTGAAGCATTTGAGAAGGTGATGAGGAGTAGCCTCCCTGATCTTTTTGATGCGCAACCTGACTTGCTTTTTCAGCTTGTGACCATGTTAAACCCATCAGTGTTACAAGAAAATGGAGTTCCAGTGTACAGCATACTGCAGGAGCCTGGAAATTTTGTGGTCACCTTTCCGAGATCTTACCATGGAGGTTTTAATCTTGGTTTAAATTGTGCAGAGGCCGTTAATTTTGCTCCTGCAGACTGGTTACCGCATGGAGGATTTGGTGCAGAGCTATATAAACAGTACCATAAGGCCGCTGTTTTGTCTCACGAGGAGTTACTCTGCGTAGTAGCCAAGAGTGCTTGCAACAGCAGAATATGTTGTTACTTGAAGAAAGAGATGCTCCGGATTTATACAAAAGAGAAAACTTGGAGAGGGAAACTCTGGAGAAATGGCATTAGTCAATCATCTTGCATGTCTCCTCGGAATTGTCCGCAGTACGTGGGAACAGAAGAGGATCCAACATGCATTATTTGCCATCAGTATCTGTATCTTTCTGCTATTGTTTGTAGATGCCGGCCATCCACTTTTGTCTGTTTGGAGCACTGGGAGCATCTGTGTGAGTGCGAGACTATGAATCTTCGTCTTCTTTATCGGCATTCACTATCTGAACTCTATGATTTAGTGCTTAGTGTGGATAAATGTACTTCTGAGAAGGTGCAGAGTGGGAATACAGCAAAGCAATTTTCTTCCTGTGAGGCCGGTGCTTTAATGAAAAAGGTGAAAGGTGGGCACGTTACTTTGGCTACTCTTGCATCTAAGTGGCTTCATCACTGCAGCGAAATTCTTCAGAATCCATTTTCTAGTGATGATTATACTGCTGCTCTAAGGGAAGCTGAGCAATTTCTTTGGGCTGGTCCTGAAATGGATCCTGTGCGTGACATGGTAAAGAACTTGATTGTTACTCAGAAATGGGCTGAAGGGATAAACAGCTGTCTGTCTACAATTGAGAAATGGTCTTCATATTGTGGCACTCATGTGGAGAAAGTTCAATGGGATTATGTTACTGAATTATTGCTCTTAAAACCTGTACCCTGTAATGAGCCAGCGTACGAGAAGTTGAAGGCCATGGCTGAAGAGGTGAGGGTGCTGGTCCAAGAGATTAGAAGGGCTCAATCAAAGAGTTCAAATTTAAATGAGTTGGAAAGTCTGTATACCCGATCTTGCGAGTTGCCATTCTATCTCAAGGAGAGTGAAGATTTATTGAACAAAATTTCTTCAATGAAGACATGCTTAAGAAATGTTAGAAGGTGCATCTCCATGGAGCATCCGAATGTGGTCGATGTTGCTGTTCTTCATAAGTTGAAGTTAGAGATGTCGGAGCTGCGACTTCAACTTCCAGAGACAGAGTTTCTGCTGAATCTTCTACACAAAGCTGAATCCTGTCGTATTCAGTGTGGAAAACTTATGAGTGGTGTCATGAATATGAAGGATGTCGAAGCACTGCTTCAGGAATGGGAGAGTTTTAATGTTGACATAGCTGAGTTGAAACTTTTGAGGCAATATCATGCTGAAGCTGTCTCTTGGCTTTCTCGCTTTAAAGATATTTTACAGCATGCACATGAACGGGAGGATCAAGAAAACATTGTTAATGAGCTAATTTGCATTCTGGAAGAAGGAAATTCTTTGAAAATCAAAGTTGATGAACTTCCTTTAGTTGAGGTTGAGTTGAAGAAAGCTTACTGTAGGGAAAAGGCTCTGAGGGCACATGACAGTAAGATGTCCTTGGAGTTCATTCAACAGCTGATAACGCAGGCTGAAGTGCTTCATATTGAAGGAGAGAAATTCTTTGTTCACTGGTCTGGAGTTCTTGCAGTTGCCTTGAAGTGGGAGGAAAGAGCACAAGATATGCTTTCACGCAAGACTTCTATTCATGAATTTAATGATGTAATAAGGGCTTCAGAAGGTATATTAGTGATCCTTCCTTCTCTCGGTGACATCATGGATGCTATGTCAGAGGCTAACTCCTGGTTAAATAATTCAAAGCCATTTTTAGATTTTCCTACACCACCATCAAGTTCGTCTCGGAAAGTTGAGGAGTTGCAGATGTTGGTTTCTCAATCAAAGCTTCTTAAGATATGCTTTAAGGAAGGGAAGTTGCTTCAAATGGTTTTGGAAAACTGCAAAGAATGGGAGGAAGACGCTCATTCTGTACTTGAGGAAACTAATTGCTTACTCAATTTAGATATCACTGCCTCTGAAATAAGGAATGGCCTTGCATCCAAAATAAGTAATCTTTTATCTAGGATAGAATCAGCGAGGAGCTCTGGTATGTCACTTGATTTTGACTTTCACGAGATGCCAAAACTTCGAAATGCACATTCCACACTTCGATGGTGCAGTGAAGCCCTCTCTTTCTGCTCAATATGTCCTTCTCTTGAGGGTGTTTTGAACTTAGTGAAGGATGCTGAGCATCTGTCTAGCGAGTACACTACCACTACCTTATTTAACTACTTGGCTGAAGGGGTTAAATGGGTTCATTATGTGTTGGAAATAATACCTGCACCATGGAGTTTTAGAAGATGCAAGTTAAGTGTTGCGGAAGAAGTCCTTGCCAATTCTCAGAGGTTCAGTGTTTCCTTCAGTTCAGTAATCTGTCAACTTGAAAATGCCATCCTGAAACATAAGCTGTGGATGGAACAAGTGCACAACTTTCTTAATTTAAGCTCTAGGGATCGCTCTTGGCCCTCAATTTTAAAGCTCAATGAACATGGAAATTCTGCAGCATTTGAATGTTCAGAACTGCATTGGGTCATATCTGAGGTTGAGAAGATTGATAATTGGAGAAAACGCTGCTTGGACAACGTAGGAGCTTCAATTGAAGATGGATATACATTATTGGATGCTTTACAAAAGATAAAGCTGAGTCTGGATAGATCTTTATCCATATACAGCACGATGGAAGAAGAAAAGACAAGAAACTTATGCTGCCGTTGCTCTCATAATATTGTGGATCAAAAATTTCTTGCATGTTCAATATGTAAGGACTGCTACCATTTGCACTGCCATGGACCGACTGCTGGTGATGCAGACCTTGAAATGTTCATTTGCCCCTACTGCAAAATTTCCAGCGGCAGTCCTCCTTTTCCAGTTGGGATTGGTCCTTTGAGTTTTGGACCGACCAGGGCTGAACTGGACACACTTCAAGAACTCCTTGATGATGCTGAGCATTTCTGTGTATGGATTGATGAGAGAGATGCACTGAACCAACTTCTTGAGCGGGCTCTTTCATGCCAAAGTTGCCTGAGAGAAATAGTTGATCTTGCATCCGCAAATGTTGGCAGTGATATTGAGGTTATTTCTCAGAAGCTGACTGCTGCTCTAAAGGCTATTGATATCGCTGGTGTCTGCAATTCCAATGACATTTGCAAGCTTCAGCTCGCATCAGCTAAAAATTCATGGAAGGTGCAAGTTAATAGATTGCTAGATGGCTCACAGAAGCCCTCTATAGAACAGATCCAGATGCATTTGATTGAGGGACAGAAAATGCAAATACCGCCTGAAGATTATTATGTGCAGAAACTTGTGAAGTGGAAGTCAATGGCAGTTGAGTGGACAGAAAAGGCTAACCAGGTTGCAACAGATTTCGGGCTTCTTGACCTAGGAAGTGTTTTTGAGCTTATTGTGCAAGGTGAAAGGTTACCTGTTTGTGTGAACAAGGAGCTTAAGTTTTTAAAAGCACGAAGCATGTTGCATTGTATTTGTCGGAAACCCTACGATCGGAAAGGCATGACTCCGTGTGATCAATGTGATGAGTGGTATCACTTGGACTGCATGGGGTTGCCGTACCGACCAGATTTCTACATCTGTCCTGCATGTAAACCTCAGGAAGAAGGGCTTTCTCAAAGTTCACAAGATCATGAGAGATTGATTAGTGGGAGATTTGTGGAGCCTAGAACCCCATCCCCGCGACATGCAGAATCAAGAAAGAGGCAGAAGAGAGATGCACCATGTCTCACTGGAAAGATGGCTTTGAACAAGGATCATCGCAATGTAACATGTCCCAGTGGTATTGAAAGACTTTGGTGGCGGAATCGGAAACCCTTCAGAAGGACGGCGAAAAGGCGCCTTGATCTTCAAAGTCTTTCCCCGTTGTTCTGTATACAAAAATAG 5517 0.4209 MLMGKGRTRAVEKGVVGQSGSGVLSGSLNNIPSGPVYYPTEDEFEDPLEFIYKVRPEAEPYGICRIVPPKNWKPPFALDLDSFSFPTKTQAIHQLQARPAACDSKTFDLEYNRFLEKTCGKKAKKRVCFEGDDLDFCRLFNAVKRYGGYDEVVKRKKWGEVAKILKPGRKVSDCGKHVLSLLYLEHLYDYENYYNGLNIDSTKSFKKGVYYERTNQQRDEFSASKRRNKNNEGVGVKEEEHDQICEQCKSGLHGEVMLLCDRCDKGWHIYCLSPPLKHVPPGNWYCFECLNSDKDSFGFVPGKHYTLEAFRRVADRFRKKWVGSGSVSRVQVERKFWEIVDGSLGEVEVMYGSDLDTSQLGSGFPRTHDQRPQSIDAKIWNEYCSSPWNLNNLPKLKGSVLQAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSMNYLHWGEPKCWYSIPGSQAEAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSILQEPGNFVVTFPRSYHGGFNLGLNCAEAVNFAPADWLPHGGFGAELYKQYHKAAVLSHEELLCVVAKSACNSRICCYLKKEMLRIYTKEKTWRGKLWRNGISQSSCMSPRNCPQYVGTEEDPTCIICHQYLYLSAIVCRCRPSTFVCLEHWEHLCECETMNLRLLYRHSLSELYDLVLSVDKCTSEKVQSGNTAKQFSSCEAGALMKKVKGGHVTLATLASKWLHHCSEILQNPFSSDDYTAALREAEQFLWAGPEMDPVRDMVKNLIVTQKWAEGINSCLSTIEKWSSYCGTHVEKVQWDYVTELLLLKPVPCNEPAYEKLKAMAEEVRVLVQEIRRAQSKSSNLNELESLYTRSCELPFYLKESEDLLNKISSMKTCLRNVRRCISMEHPNVVDVAVLHKLKLEMSELRLQLPETEFLLNLLHKAESCRIQCGKLMSGVMNMKDVEALLQEWESFNVDIAELKLLRQYHAEAVSWLSRFKDILQHAHEREDQENIVNELICILEEGNSLKIKVDELPLVEVELKKAYCREKALRAHDSKMSLEFIQQLITQAEVLHIEGEKFFVHWSGVLAVALKWEERAQDMLSRKTSIHEFNDVIRASEGILVILPSLGDIMDAMSEANSWLNNSKPFLDFPTPPSSSSRKVEELQMLVSQSKLLKICFKEGKLLQMVLENCKEWEEDAHSVLEETNCLLNLDITASEIRNGLASKISNLLSRIESARSSGMSLDFDFHEMPKLRNAHSTLRWCSEALSFCSICPSLEGVLNLVKDAEHLSSEYTTTTLFNYLAEGVKWVHYVLEIIPAPWSFRRCKLSVAEEVLANSQRFSVSFSSVICQLENAILKHKLWMEQVHNFLNLSSRDRSWPSILKLNEHGNSAAFECSELHWVISEVEKIDNWRKRCLDNVGASIEDGYTLLDALQKIKLSLDRSLSIYSTMEEEKTRNLCCRCSHNIVDQKFLACSICKDCYHLHCHGPTAGDADLEMFICPYCKISSGSPPFPVGIGPLSFGPTRAELDTLQELLDDAEHFCVWIDERDALNQLLERALSCQSCLREIVDLASANVGSDIEVISQKLTAALKAIDIAGVCNSNDICKLQLASAKNSWKVQVNRLLDGSQKPSIEQIQMHLIEGQKMQIPPEDYYVQKLVKWKSMAVEWTEKANQVATDFGLLDLGSVFELIVQGERLPVCVNKELKFLKARSMLHCICRKPYDRKGMTPCDQCDEWYHLDCMGLPYRPDFYICPACKPQEEGLSQSSQDHERLISGRFVEPRTPSPRHAESRKRQKRDAPCLTGKMALNKDHRNVTCPSGIERLWWRNRKPFRRTAKRRLDLQSLSPLFCIQK* 1839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01273 1838 SMART PHD_3 244 290 IPR001965 -
Pte14g01273 1838 SMART PHD_3 1443 1489 IPR001965 -
Pte14g01273 1838 SMART PHD_3 1700 1742 IPR001965 -
Pte14g01273 1838 SUPERFAMILY FYVE/PHD zinc finger 1440 1492 IPR011011 -
Pte14g01273 1838 FunFam Predicted protein 350 553 - -
Pte14g01273 1838 MobiDBLite consensus disorder prediction 217 236 - -
Pte14g01273 1838 PANTHER LYSINE-SPECIFIC DEMETHYLASE 29 997 - -
Pte14g01273 1838 CDD PHD_SF 1444 1488 - -
Pte14g01273 1838 Pfam PHD-finger 244 291 IPR019787 -
Pte14g01273 1838 SUPERFAMILY FYVE/PHD zinc finger 213 290 IPR011011 -
Pte14g01273 1838 Pfam jmjN domain 35 68 IPR003349 -
Pte14g01273 1838 FunFam Lysine-specific demethylase rbr-2 isoform A 246 291 - -
Pte14g01273 1838 SMART cupin_9 382 548 IPR003347 -
Pte14g01273 1838 FunFam Transcription factor jumonji (JmjC) domain-containing protein 21 124 - -
Pte14g01273 1838 SMART bright_3 102 196 IPR001606 GO:0003677
Pte14g01273 1838 SMART JmjN_1 33 74 IPR003349 -
Pte14g01273 1838 CDD PHD_RSF1 245 289 - -
Pte14g01273 1838 ProSiteProfiles Zinc finger PHD-type profile. 242 292 IPR019787 -
Pte14g01273 1838 SMART ARID_2 98 191 - -
Pte14g01273 1838 Pfam PLU-1-like protein 1140 1399 IPR013637 -
Pte14g01273 1838 Pfam PLU-1-like protein 892 987 IPR013637 -
Pte14g01273 1838 Pfam PLU-1-like protein 985 1127 IPR013637 -
Pte14g01273 1838 Gene3D Cupin 282 574 - -
Pte14g01273 1838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 236 281 IPR013083 -
Pte14g01273 1838 ProSiteProfiles JmjC domain profile. 382 548 IPR003347 -
Pte14g01273 1838 ProSiteProfiles ARID domain profile. 101 195 IPR001606 GO:0003677
Pte14g01273 1838 SUPERFAMILY ARID-like 83 202 IPR036431 GO:0003677
Pte14g01273 1838 SUPERFAMILY FYVE/PHD zinc finger 1696 1746 IPR011011 -
Pte14g01273 1838 CDD ARID 103 191 - -
Pte14g01273 1838 MobiDBLite consensus disorder prediction 1760 1783 - -
Pte14g01273 1838 Gene3D Cupin 17 141 - -
Pte14g01273 1838 ProSitePatterns Zinc finger PHD-type signature. 245 289 IPR019786 -
Pte14g01273 1838 Pfam ARID/BRIGHT DNA binding domain 124 191 IPR001606 GO:0003677
Pte14g01273 1838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1428 1493 IPR013083 -
Pte14g01273 1838 SUPERFAMILY Clavaminate synthase-like 334 567 - -
Pte14g01273 1838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1687 1743 IPR013083 -
Pte14g01273 1838 Pfam C5HC2 zinc finger 624 675 IPR004198 -
Pte14g01273 1838 Coils Coil 819 842 - -
Pte14g01273 1838 Pfam JmjC domain, hydroxylase 415 531 IPR003347 -
Pte14g01273 1838 ProSiteProfiles JmjN domain profile. 34 75 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01273 Pte-Chr14 33866361 33879852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01273 43 98 JUMONJI Transcription Factor Family AT4G20400 50.000 1.16e-09 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pte14g01273 PLU-1 5.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01273 K11446 - gmx:100819576 2320.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01273 14 33866361 33879852 Pte14g01273 14 33866361 33879852 RCT