Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01271 ATGGATGGAAGAGAGGCTATGACACTCGCTGGTGGTTCAGCTTCATATTACATACATAGAGGAGGCGCTGGCGGTTCTGGGTCTGGAACACCGTATCAACAGCCAGTGTTCAGGCCTGTGTCCAGTGCCAGCATTCCTGCTCAGTCCGACGTGCAAGGAGGCTCGGTGGGACAGTCATTCTCTGTAGATCAGTCACATTCCGATTTTAATCATGGTGTCAGCATGAATGTTTCTCAAGGAGTACCTTCAACTGAACCTGTGAAAAAGAAACGAGGAAGGCCTCGTAAATACGGTCCTAATGGACCGATGTCTTTAAGACTTTCGCCCATGACTGGCACTGTTAATTCTACCCCAGGCTCAGGCTCGCTATCTCCAAAAAAGGGTAGAGGACGTCCTCCTGGGAGTGGAAGAAAGCAGCAGTTAGCTTATTTGGGTGAATGGATGAATAATTCAGCTGGAGTGGCTTTTGCTCCACACGTGATCACAGTTGGAGTTGGAGAGGATGTTGTAGCAAAGATGTTATCTTTTTCGCAACAGAGACCACGGGCACTATGCATTTTGTCAGGCACCGGGGCAGCTTCTTCTGTTACACTGCGGCAGCCAGCTTCTGCTGATGTCAGCGGCACCTATGAGGGCCGATTTCAAATATTATGCCTGTCTGGTTCTTACTTGGTTGCCGAAGAAGGTGGTCCTCGCAATAGAACAGGTGGAATGAGTGCTTCTCTCTCTAGTCCTGATGGTCATGTTATAGGCGGTGCTATTGCCATGCTTATAGCTGCCAGTCCAGTGCAGGTCGTATTATGCAGTTTTGTGTATGGAAATGGAAGTTCCAAGACAAAGACTAAAGAAATAACTTCCAAGAGAAATGATTCAAATGAAGATTCCGAGACTATGGAAGATGATAAGTTAACCACTCCAGCCAGTGCTCCTGCTTCACTAAGTTACACTCCCTCTGCTTCAGGTGGCTGGCCTGTATCACGGTCAGTAGACCTGAAAAGTCCAACGGGGATAGACCTGACGCGTGGGTGA 1029 0.484 MDGREAMTLAGGSASYYIHRGGAGGSGSGTPYQQPVFRPVSSASIPAQSDVQGGSVGQSFSVDQSHSDFNHGVSMNVSQGVPSTEPVKKKRGRPRKYGPNGPMSLRLSPMTGTVNSTPGSGSLSPKKGRGRPPGSGRKQQLAYLGEWMNNSAGVAFAPHVITVGVGEDVVAKMLSFSQQRPRALCILSGTGAASSVTLRQPASADVSGTYEGRFQILCLSGSYLVAEEGGPRNRTGGMSASLSSPDGHVIGGAIAMLIAASPVQVVLCSFVYGNGSSKTKTKEITSKRNDSNEDSETMEDDKLTTPASAPASLSYTPSASGGWPVSRSVDLKSPTGIDLTRG* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01271 342 Pfam Plants and Prokaryotes Conserved (PCC) domain 158 271 IPR005175 -
Pte14g01271 342 CDD DUF296 158 270 IPR005175 -
Pte14g01271 342 PRINTS AT-hook-like domain signature 88 98 IPR017956 GO:0003677
Pte14g01271 342 PRINTS AT-hook-like domain signature 124 135 IPR017956 GO:0003677
Pte14g01271 342 MobiDBLite consensus disorder prediction 106 123 - -
Pte14g01271 342 MobiDBLite consensus disorder prediction 307 323 - -
Pte14g01271 342 MobiDBLite consensus disorder prediction 27 83 - -
Pte14g01271 342 ProSiteProfiles PPC domain profile profile. 153 292 IPR005175 -
Pte14g01271 342 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 58 298 IPR039605 GO:0003680
Pte14g01271 342 MobiDBLite consensus disorder prediction 279 342 - -
Pte14g01271 342 MobiDBLite consensus disorder prediction 281 301 - -
Pte14g01271 342 SUPERFAMILY AF0104/ALDC/Ptd012-like 156 272 - -
Pte14g01271 342 MobiDBLite consensus disorder prediction 16 138 - -
Pte14g01271 342 Gene3D - 158 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01271 Pte-Chr14 33856642 33859709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01271 1 343 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 51.414 1.48e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01271 - - qsa:O6P43_034235 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01271 14 33856642 33859709 Pte14g01271 14 33856642 33859709 RCT