Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01263 ATGCGGCAACCTGGAACATATTCTGGTTTACTTTGTGGAGGCATATCAGGTAAAACAGGTCCTCACTCACTGCCACTGGCAAGGATCAAGAAGATCATGAAGAAATCTGGGGACGATGTAAAGATGATATCAGGAGAGGCCCCACTAGTTTTTGCAAAAGCTTGTGAGCTTTTCATCGAGGAACTGACACGAAGGTCGTGGATGATGACCATGCAAGGTAAGAGGAAGGCTTTACACAAAGAGGACGTGGCTTCAGCTGTAGTCGCCACTGATATCTTTGATTTTCTGGTTTATCTGGTTTCCAATACCGACGACACATTGACCACCGTCACTGGGCAAATGGAAACGTCAGATTCGTAA 360 0.4583 MRQPGTYSGLLCGGISGKTGPHSLPLARIKKIMKKSGDDVKMISGEAPLVFAKACELFIEELTRRSWMMTMQGKRKALHKEDVASAVVATDIFDFLVYLVSNTDDTLTTVTGQMETSDS* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01263 119 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 23 87 IPR003958 -
Pte14g01263 119 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 105 - -
Pte14g01263 119 SUPERFAMILY Histone-fold 17 96 IPR009072 GO:0046982
Pte14g01263 119 Gene3D Histone, subunit A 15 101 IPR009072 GO:0046982
Pte14g01263 119 FunFam Nuclear transcription factor Y subunit C 14 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01263 Pte-Chr14 33821181 33821540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01263 22 104 CCAAT-HAP5 Transcription Factor Family AT1G54830 65.060 8.95e-33 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Pte14g01263 CBFD_NFYB_HMF 1.6e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01263 - - qsa:O6P43_034221 188.348