Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01253 ATGTTAGAGGTTACGAAGGAGCAAGAGGAGTTCCTCGTGGATTCAGAAGAACAAATGAAGCATTCCTTCTTTGCTTCTCCACTCACTGGCAGTTCGGATGGCTCTGTTCAGGAATCACCCCCTCTTACAGGGAGGATTACAGGTCCAGCTAGGCGTTCCACAAAAGGCTGCTGGGAAAAGGAAGAGGACATAAAATTGACTGAAGCTGTGAAGAAGTTCCGAGGGAGAAGTTGGAAGAAAATAGCTTCATATCTTCCAGGCCGTACTGATGTTCAGTGTCTACATTGCTGGCAAAAGGTTTTAAATCCTGAACTTGTGAAGGGGCAGTGGACAAAGGAGGAGGACGATCAGGTGATTGAACTAGTTCGTAATTATGGCTGTAAGAGATGGTCTGCTATCCTGCCTGGTCGAAGTGGAAAACAATGGCTAAACTGA 435 0.4621 MLEVTKEQEEFLVDSEEQMKHSFFASPLTGSSDGSVQESPPLTGRITGPARRSTKGCWEKEEDIKLTEAVKKFRGRSWKKIASYLPGRTDVQCLHCWQKVLNPELVKGQWTKEEDDQVIELVRNYGCKRWSAILPGRSGKQWLN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01253 144 CDD SANT 110 141 IPR001005 -
Pte14g01253 144 Gene3D - 54 106 - -
Pte14g01253 144 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 144 IPR017930 -
Pte14g01253 144 MobiDBLite consensus disorder prediction 24 42 - -
Pte14g01253 144 Gene3D - 107 144 - -
Pte14g01253 144 Pfam Myb-like DNA-binding domain 55 101 IPR001005 -
Pte14g01253 144 Pfam Myb-like DNA-binding domain 107 141 IPR001005 -
Pte14g01253 144 SUPERFAMILY Homeodomain-like 57 133 IPR009057 -
Pte14g01253 144 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 51 141 - -
Pte14g01253 144 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Pte14g01253 144 SMART sant 54 103 IPR001005 -
Pte14g01253 144 SMART sant 106 144 IPR001005 -
Pte14g01253 144 FunFam Transcriptional activator Myb isoform A 54 106 - -
Pte14g01253 144 MobiDBLite consensus disorder prediction 24 53 - -
Pte14g01253 144 ProSiteProfiles Myb-like domain profile. 50 101 IPR001005 -
Pte14g01253 144 CDD SANT 58 101 IPR001005 -
Pte14g01253 144 ProSiteProfiles Myb-like domain profile. 102 141 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01253 Pte-Chr14 33772170 33773465 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01253 44 141 MYB Transcription Factor Family AT5G11510 64.356 2.81e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte14g01253 Myb_DNA-binding 4.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01253 - - cave:132173384 165.236