Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte14g01251 | ATGCGGGCATTTTGCTTAACGAGGTCGCTCTTGCTTGTCGGGCAGTCTTCGTCCTGTACAATGCTTTTGCCCATGTCCAAAGTGGGTTGTTTACTAACTAGTTCTCGTTCTTTGAGTCACGTCAAGTGTGATCATGCACCCCTCACGCTTTCTAGCCTCGGTTTTGTTGGTGAAACTAAGACATCTGATACAAGCAAATCAGTTAAGCCTAAGCCAACGCGTTCTTCTAATGTATTACCTAAAACCAAAGCGAAAGTAGTGCCGACCGAAGAAACCAAGCCTAACGTGAGGAAAAATACGCGGGAACAAGAGTTTGTTCCTTTTGCTGCAAACTCATTCTCTGAACTTGGGCTTCCAGCCTCGTTGATTGAGAGATTAGAGAATGAAGGTTTCACAGTTCCAACAGAAGTTCAGTCTGCCGCTATTCCCCCTATTCTTGATAACCATGATGTTGTAATCCAGTCCTATACGGGGTCAGGAAAAACCTTGGCTTATCTCCTCCCTATACTCACTAATGTAGGTCCTTTCAGTAAGAAGTCTTCTTATGAAGACGGTGACAGTGGTGGTACGAAGAAAATGGGGATACAGGCAGTGATTGTTGCTCCTTCTAGGGAGCTCGGCATGCAAATTGTGAGGGAGTTTGAGAAGATATTAGGTCCTACATACAAGAGGGCAGTTCAGCAGCTTGTGGGAGGAGCAAACCGATCTAGGCAGGAGGAAGCTCTCAGGAAAAATAAACCAGTCATTGTTGTGGGAACACCTGGTCGAATTGCAGAGATAAGTGCTGCTGGGAAACTTCATACTCATGGGTGCCGCTACTTGGTTTTGGATGAGGTTGATGAACTATTGTCATTTACATTCCGGGAGGACATGCATCGGATATTAGAACACGTGGGAAGAAGATCAGGTGCTGACCCTCGTGGACTTGCAACTGAGCTTGCTAGACGGACTGAGCGTCGGCTTGTTATGGTGTCTGCAACTGTGCCTTTCTCTGTTATCAGAGCAGCTAGGAGCTGGGGGCATGAACCGCTTCTTGTCCAAGCCAAGAAAGTTGTCCCGCTTGAATCATTTTCACCTCAAGAGCCTGTAAACTTGCCTGGTTCTGCATCCAACCTTAATGCAGCGGCAAATACAAACCCACAGCCTCAAGTAGCATCGCAGAGCCTTCCCCCTTCACTAAAACACTATTATTGTGTGGCAAAAATACAGCATAAGGTTGATACATTAAGAAGGTGTGTTCATGCTCTGGATGCCAAGTGTGTTATAGCTTTCATGAACCATACGAAGCAGTTAAAAGATACAGTTTTCAAGCTCGAAGCTCGTGGAATGGAAGCTGCAGAGTTACATGGTGATCTTGGGAAGCTTGCTAGATCGACAACCCTTAAGAAATTCAAGAATGGAGAGTTGAGAGTTCTGGTGACGAATGAATTGTCAGCAAGAGGTTTAGATGTAGCAGAATGTGATCTCGTGGTTAATCTAGAGTTACCCACAGACTCAATTCACTATTGCCACCGAGCAGGCAGAACTGGTCGACTTGGTAGGAAGGGTACAGTGTTATCCATCTGCGAGGAACCAGAAGTATTTGTTGTCAAGAAACTGCAGAAGCAGCTTGGTGTATCAATAGCTGCATGTGAATTTACGGAGGGCAGGCTTGTTCCGACTGAAGAAGAAAAAGCTCCACAAATTTTGAAGAAACAAGGCACTCGATCTATTTAA | 1716 | 0.4545 | MRAFCLTRSLLLVGQSSSCTMLLPMSKVGCLLTSSRSLSHVKCDHAPLTLSSLGFVGETKTSDTSKSVKPKPTRSSNVLPKTKAKVVPTEETKPNVRKNTREQEFVPFAANSFSELGLPASLIERLENEGFTVPTEVQSAAIPPILDNHDVVIQSYTGSGKTLAYLLPILTNVGPFSKKSSYEDGDSGGTKKMGIQAVIVAPSRELGMQIVREFEKILGPTYKRAVQQLVGGANRSRQEEALRKNKPVIVVGTPGRIAEISAAGKLHTHGCRYLVLDEVDELLSFTFREDMHRILEHVGRRSGADPRGLATELARRTERRLVMVSATVPFSVIRAARSWGHEPLLVQAKKVVPLESFSPQEPVNLPGSASNLNAAANTNPQPQVASQSLPPSLKHYYCVAKIQHKVDTLRRCVHALDAKCVIAFMNHTKQLKDTVFKLEARGMEAAELHGDLGKLARSTTLKKFKNGELRVLVTNELSARGLDVAECDLVVNLELPTDSIHYCHRAGRTGRLGRKGTVLSICEEPEVFVVKKLQKQLGVSIAACEFTEGRLVPTEEEKAPQILKKQGTRSI* | 572 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte14g01251 | 571 | MobiDBLite | consensus disorder prediction | 58 | 97 | - | - | |
Pte14g01251 | 571 | MobiDBLite | consensus disorder prediction | 58 | 82 | - | - | |
Pte14g01251 | 571 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 103 | 346 | IPR027417 | - | |
Pte14g01251 | 571 | PANTHER | DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL | 63 | 565 | - | - | |
Pte14g01251 | 571 | Gene3D | - | 77 | 348 | IPR027417 | - | |
Pte14g01251 | 571 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 408 | 552 | IPR001650 | - | |
Pte14g01251 | 571 | CDD | DEADc | 122 | 347 | - | - | |
Pte14g01251 | 571 | SMART | helicmild6 | 432 | 513 | IPR001650 | - | |
Pte14g01251 | 571 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 111 | 139 | IPR014014 | GO:0003724 | |
Pte14g01251 | 571 | Gene3D | - | 390 | 549 | IPR027417 | - | |
Pte14g01251 | 571 | CDD | SF2_C_DEAD | 393 | 522 | - | - | |
Pte14g01251 | 571 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 148 | 541 | IPR027417 | - | |
Pte14g01251 | 571 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 142 | 346 | IPR014001 | - | |
Pte14g01251 | 571 | SMART | ultradead3 | 130 | 357 | IPR014001 | - | |
Pte14g01251 | 571 | MobiDBLite | consensus disorder prediction | 363 | 387 | - | - | |
Pte14g01251 | 571 | Pfam | Helicase conserved C-terminal domain | 408 | 513 | IPR001650 | - | |
Pte14g01251 | 571 | Pfam | DEAD/DEAH box helicase | 135 | 332 | IPR011545 | GO:0003676|GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte14g01251 | Pte-Chr14 | 33764048 | 33765763 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte14g01251 | 112 | 541 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 24.942 | 3.73e-42 | 154 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte14g01251 | - | - | cill:122280534 | 772.696 |