Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01247 ATGGCGACCACAAGGTCACCTAACCGTTCCTCAGAGGACCTCATCGATCCAATACCATTTCTCGGAAATTCAGGTGGGTCTTCCGATGAAATCAGCACCAGCCGTCGATTCGTCCGGAGACAGAGCCTACGACAAGCAGCTCGCTTGCTACGCCAAGCCAGTAGCCGGAGAATGATGCGCGAGCCGTCCATGTTGGTCAGAGAGACTGCTGCCGAGCAATTAGAAGAGCGGCAAAGCGATTGGGCTTATTCTAAGCCAGTTATCATTCTTGATTTGGTTTGGAACTTTGCTTTCGTAGTTGTTGCTGCAAGTGTTTTGGTTTTGAGCGGCAAAGAATCGCCCAGTATGCCTCTTAGGCTCTGGATCATTGGCTATGCTGTTCAGTGTATCCTCCATATGGTATGTGTGATGATTGAGTACCGCCGGCGTAGGCAGGCCCGTCGGGGTCGCTACACACCGGTGCATGATGGGGTTGGCAGCGGTTCAAATTTGAGTCCCAGCGTTGCGAACGACTCTACTCAGTATGTCGTGTTGAACCAATTGGAGGAGGAAGGCACTGGGAGTGTTGCTAAGCATCTGGAATCAGCGAATACCATGTTTTCATTCATCTGGTGGATTATTGGTTTCTACTGGGTATCAGCTGGTGGTCAGTCTTTGGCAGACGACTCTCCGCAGCTTTACTGGCTATGTATTATATTCCTGGGTTTTGATGTGTTCTTTGTTGTTTTCTGTGTTGCTCTGGCCTGCATTATTGGTATAGCTGTTTGCTGCTGTCTTCCCTGTATAATAGGACTTCTATATGCTGTGGCGGATCAGGAAGGAGCATCAAAGGAAGAAATTGAACAGTTGTCTAAATTCAAATTTCGAACAAATGACAGTAATGAGAAACTTGCTGGTGACATACAAGGTTCGCTTGGAGGAACAATGGTAGAATGTGGCAGTGAGACACCTATAGAGTGCGTTCTGTCGCCCGAAGATGCGGAGTGTTGCATCTGCCTCTCAGCTTACGATGAAGGTGTTGAACTTAGACAACTTCCTTGTGGTCATCATTTCCATTGTTCCTGTGTGGATAAGTGGTTGCATATAAATGCTACCTGTCCCCTCTGCAAATATAACATCCTGAAGAACATCCGTGGGCAAGAGGAAGCATAG 1152 0.4783 MATTRSPNRSSEDLIDPIPFLGNSGGSSDEISTSRRFVRRQSLRQAARLLRQASSRRMMREPSMLVRETAAEQLEERQSDWAYSKPVIILDLVWNFAFVVVAASVLVLSGKESPSMPLRLWIIGYAVQCILHMVCVMIEYRRRRQARRGRYTPVHDGVGSGSNLSPSVANDSTQYVVLNQLEEEGTGSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLADDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIGLLYAVADQEGASKEEIEQLSKFKFRTNDSNEKLAGDIQGSLGGTMVECGSETPIECVLSPEDAECCICLSAYDEGVELRQLPCGHHFHCSCVDKWLHINATCPLCKYNILKNIRGQEEA* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01247 383 ProSiteProfiles Zinc finger RING-type profile. 329 370 IPR001841 -
Pte14g01247 383 CDD RING-H2_RNF6-like 328 370 - -
Pte14g01247 383 MobiDBLite consensus disorder prediction 1 31 - -
Pte14g01247 383 PANTHER TARGET OF ERK KINASE MPK-1 51 375 - -
Pte14g01247 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 321 381 IPR013083 -
Pte14g01247 383 FunFam E3 ubiquitin-protein ligase At1g12760 315 380 - -
Pte14g01247 383 SMART ring_2 329 369 IPR001841 -
Pte14g01247 383 Pfam Ring finger domain 328 370 IPR001841 -
Pte14g01247 383 SUPERFAMILY RING/U-box 319 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01247 Pte-Chr14 33752136 33755611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01247 24 375 C3H Transcription Factor Family AT1G68070 48.169 1.39e-114 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01247 - - qsa:O6P43_034207 575.089