Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01233 ATGGTTAGAGGAAAAACACAGATGAAGCGCATAGAAAACAATACAAGCAGGCAAGTGACTTTCTCTAAGAGAAGAAATGGACTGCTTAAGAAGGCATTTGAGCTATCTGTGCTTTGCGATGCGGAGGTTGCTCTGATTATATTTTCTCCAAGAGGGAAACTTTATGAATTCTCCAGCTCCAGTATAAACAAAACCATTGAGCGTTATGCAAAGAAGATCAAGGCCCTAGGTCTCAGCAACAACGGATTTCCAGAAATGGCTCAGCATGTGAAGGAAGCTGCAATAAACATGGAGAAAAAGATTGAGCAACTGGAAGTTACTAAAAGAAGGCTATTAGGAGATGGTCTAGACACTTGTACGCTGCATGAGTTACAACAGATAGAAAACCAATTGGAACGAAGCTTATGCAAAATCAGAACGAGAAAGAAACAGTTATTCAAGGAGCAGATTGAGAAACTGAAACAGGAGGAGAAGAACCTCTTGGAAGAAAATACCAGGCTAAAAGAAGAGTTTCACAAAATACAGCTGGTGCAGCCATCAAGTCATCAGCAGCAAACTGAATCACTCAACGAAGAAAGTATAGATGTAGAGACAGAGTTGTTTATTGGACCTCCTGAGCGTCGGACATCAAAAAACACGCAAAATCGAAGCTAA 654 0.4067 MVRGKTQMKRIENNTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSINKTIERYAKKIKALGLSNNGFPEMAQHVKEAAINMEKKIEQLEVTKRRLLGDGLDTCTLHELQQIENQLERSLCKIRTRKKQLFKEQIEKLKQEEKNLLEENTRLKEEFHKIQLVQPSSHQQQTESLNEESIDVETELFIGPPERRTSKNTQNRS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01233 217 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 179 - -
Pte14g01233 217 SUPERFAMILY SRF-like 3 73 IPR036879 GO:0003677|GO:0046983
Pte14g01233 217 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Pte14g01233 217 ProSiteProfiles K-box domain profile. 87 180 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pte14g01233 217 Coils Coil 87 114 - -
Pte14g01233 217 MobiDBLite consensus disorder prediction 178 217 - -
Pte14g01233 217 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Pte14g01233 217 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Pte14g01233 217 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Pte14g01233 217 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Pte14g01233 217 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Pte14g01233 217 FunFam Agamous-like MADS-box protein AGL13 13 79 - -
Pte14g01233 217 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Pte14g01233 217 CDD MADS_MEF2_like 3 71 IPR033896 GO:0000977|GO:0045944
Pte14g01233 217 Coils Coil 124 170 - -
Pte14g01233 217 Pfam K-box region 87 171 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pte14g01233 217 Gene3D - 13 81 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01233 Pte-Chr14 33584776 33590224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01233 1 211 MADS-box Gene Family AT4G22950 60.280 2.43e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Pte14g01233 K-box 3.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01233 - - bhj:120092764 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01233 14 33584776 33590224 Pte14g01233 14 33584776 33590224 RCT