Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01229 ATGGATTATATTCCGTCCATGATGGGATTCGATCAGACTGATGAGCTGTTTCAAACTAATTCATTTCAATGCCAACTGATCTACCCCACTGATCAACAAGTACTGGCAACACATGTACTGCTACCTTCTCCAACTGCGGTTGATGTCAACCAAATTTGCACAGACAGACAGACAGCTTTAGGTGGACGGAAGCGTAAGGCACCAATTTGTTTGAATGAAATGAATGGTGACAGTCCTCATGAAACGAAGAGGAAGAAGATGGTGCATAGAGAAATTGAGAGACAAAGGAGGCAGGAGATAGCCACTCGTTACGCTTCTTTACGGTCACTCCTCCCTCTTGAATACCTAAAAGGCTTTTTGTTTTGA 366 0.4317 MDYIPSMMGFDQTDELFQTNSFQCQLIYPTDQQVLATHVLLPSPTAVDVNQICTDRQTALGGRKRKAPICLNEMNGDSPHETKRKKMVHREIERQRRQEIATRYASLRSLLPLEYLKGFLF* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01229 121 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 114 IPR036638 GO:0046983
Pte14g01229 121 Pfam Helix-loop-helix DNA-binding domain 85 112 IPR011598 GO:0046983
Pte14g01229 121 MobiDBLite consensus disorder prediction 77 92 - -
Pte14g01229 121 Gene3D - 75 117 IPR036638 GO:0046983
Pte14g01229 121 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 121 IPR011598 GO:0046983
Pte14g01229 121 MobiDBLite consensus disorder prediction 70 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01229 Pte-Chr14 33572126 33572491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01229 63 118 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25400 52.632 3.93e-12 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte14g01229 HLH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01229 - - aew:130753289 78.5666