Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01223 ATGGGTTCCGAACAGAACGACGCTACAAGCTATCAGCCTTCGGAGCCGAAACTCTGTGCCAACAACTGTGGCTTCTTTGGCAACGCCGGCACCATGAATCTTTGTTCCAAGTGCTATCGAGATTACCTGATGGCACAAGAAAAGCAGGTTTTCGCCAAAGCCTTCATGGAGAAATCCGTTAACCCTGAATCCATCGAATCACTCGGCTTCGCTAGTGCCGGAGAGCCGTGCGTTGGTCAGTCTTTTTTCGCGTTCAGTACGGAATCTTCCTCGTCTTCAGCCCCTGAGTCGAAGCCGGCGGCGATGACTTTCGGCAGCGGTCGGCCGGAACGGAAGGTTGCGACCCGTTGTGCGAATTGTAACAAGAAGGTTGGTTTGACCGGGTTCAAGTGCAAGTGTGGGAGCACTTTCTGCGGGAGCCATCGGTATCCAGAAAAGCACGAATGCGACTTTGATTTCAAAGGCGAGGGACGCGACGCTATTGCCAAGGCCAACCCTCTGGTAAAGGCTGACAAAGTCGAGAGGATCATCTGA 534 0.5318 MGSEQNDATSYQPSEPKLCANNCGFFGNAGTMNLCSKCYRDYLMAQEKQVFAKAFMEKSVNPESIESLGFASAGEPCVGQSFFAFSTESSSSSAPESKPAAMTFGSGRPERKVATRCANCNKKVGLTGFKCKCGSTFCGSHRYPEKHECDFDFKGEGRDAIAKANPLVKADKVERII* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01223 177 Gene3D - 86 172 IPR035896 -
Pte14g01223 177 FunFam Zinc finger AN1-type containing 6 89 172 - -
Pte14g01223 177 ProSiteProfiles Zinc finger AN1-type profile. 111 157 IPR000058 GO:0008270
Pte14g01223 177 Pfam A20-like zinc finger 18 40 IPR002653 GO:0003677|GO:0008270
Pte14g01223 177 SMART AN1_Zf_4 117 154 IPR000058 GO:0008270
Pte14g01223 177 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 18 61 - -
Pte14g01223 177 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 176 - -
Pte14g01223 177 SMART A20_3 16 40 IPR002653 GO:0003677|GO:0008270
Pte14g01223 177 SUPERFAMILY AN1-like Zinc finger 108 171 IPR035896 -
Pte14g01223 177 ProSiteProfiles Zinc finger A20-type profile. 13 47 IPR002653 GO:0003677|GO:0008270
Pte14g01223 177 Gene3D - 1 64 - -
Pte14g01223 177 Pfam AN1-like Zinc finger 117 153 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01223 Pte-Chr14 33544014 33544547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01223 13 176 C2H2 Transcription Factor Family AT3G52800 41.463 1.95e-37 125