Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01219 ATGGATCCAGTTAGCCATTCTCAGCTACCCCCACCTTTTCACACGAGAGATCTCCAACTACACCATCAATTTCATTCGCCGCAACAACGCAACACAGAAGATGAACACAGTGGAAGCACAACTGGACTGAATCGATCTCAGAAAAGGGAACGCGATGATGACAACAACAACAGTGAAGGCAAAGATGGGGTTGGAGGTTCTGGTGGTGATAACGAGATTACTAGAAGACCAAGAGGAAGACCTGCTGGATCCAAGAACAAGCCCAAGCCACCCATCATCATCACACGTGACAGTGCTAATGCCTTGAGAACTCATGTGATGGAAGTGGCTGATGGGTGTGATATTATTGAGAGTGTCTCCAATTTCGCAAGGCGTCGCCAAAGAGGGGTTTGTATCATGAGTGGTACCGGCACTGTGACTAATGTCACTCTAAGGCAGCCTGCCTCACCTGGTGCTGTGGTAACTCTACATGGCAGGTTTGAGATCTTATCGCTGGCCGGGTCATTTTTGCCTCCACCAGCACCACCGGCGGCGTCGGGGTTGACTATATATTTGGCAGGTGGACAAGGCCAAGTGGTTGGGGGAAGTGTTGTTGGAACACTGATAGCTTCTGGTCCAGTTGTGATAATGGCAGCTTCGTTTAGTAATGCTGCCTATGAAAGACTGCCTTTGGATGAAGACGAGCCTCCAATGCCAATGCAAGGTGGAGGTACCATTGAGTCACCGCCCGGAGCAGTTGGAGGCCAGCATCAGCAGCAGCAACAACTCCTAGGGGATGCAAATGCAGCACAACTCTTTCATGGCATGCCGCCTAATCTCCTCAATCCCATTCAGATGCCAAGCGAGCCGTATTGGGCTACTGGTCGCCCTCCATATTGA 879 0.5063 MDPVSHSQLPPPFHTRDLQLHHQFHSPQQRNTEDEHSGSTTGLNRSQKRERDDDNNNSEGKDGVGGSGGDNEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIIESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASPGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMAASFSNAAYERLPLDEDEPPMPMQGGGTIESPPGAVGGQHQQQQQLLGDANAAQLFHGMPPNLLNPIQMPSEPYWATGRPPY* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01219 292 CDD DUF296 103 170 IPR005175 -
Pte14g01219 292 ProSiteProfiles PPC domain profile profile. 99 236 IPR005175 -
Pte14g01219 292 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 34 286 IPR014476 GO:0003680
Pte14g01219 292 Pfam Plants and Prokaryotes Conserved (PCC) domain 103 216 IPR005175 -
Pte14g01219 292 PIRSF ESCAROLA 14 292 IPR014476 GO:0003680
Pte14g01219 292 MobiDBLite consensus disorder prediction 45 59 - -
Pte14g01219 292 MobiDBLite consensus disorder prediction 231 253 - -
Pte14g01219 292 SUPERFAMILY AF0104/ALDC/Ptd012-like 99 229 - -
Pte14g01219 292 MobiDBLite consensus disorder prediction 18 32 - -
Pte14g01219 292 MobiDBLite consensus disorder prediction 1 94 - -
Pte14g01219 292 FunFam AT-hook motif nuclear-localized protein 102 229 - -
Pte14g01219 292 Gene3D - 102 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01219 Pte-Chr14 33532647 33533525 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01219 1 293 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 60.119 5.68e-94 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01219 - - pop:7478098 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01219 14 33532647 33533525 Pte14g01219 14 33532647 33533525 RCT