Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01217 ATGGAGACAAGGGATGGAGTTACTAGTGGGGTCACGGTGGTGGGATCAGACGCTCCGTCAGAATATCATGTCGCTCCGAGGACGGAAAACACAACTCAGATCGTTGGATCGACGATGACACCAGCGGCGCCGGCAGCTCAGGTGAGTGGACAGCCACCTCAGTCGGCGGCAGTCACGACGATGCCGGCAAAGAAGAAGAGGGGTAGACCCAGAAAGTACGGACCAGATGGTTCGGTGACTGTAGCTCTGTCGCCAAAGCCCATATCTTCTTCAGCTCCGCTACCTTCAGTAATCGACTTCTCGGCTGAAAAGCGTGGAAAAGTTCGGCCAGCTAGCTCAGTGAGCAAACCAAAATTTGAGGTGGAAAACATAGGTGAATGGGTAGCCTGCTCTGTTGGGACTAATTTTACCCCACATATTATCACGGTCAATGCTGGCGAGGATGTTACAATGAAAGTCATATCATTTTCACAACAAGGTCCGCGAACAATATGCATTCTCTCTGCAAATGGTGTCATATCAAGTGTTACACTTCGTCAGCCCGATTCTTCTGGGGGTACCTTGACATATGAGGGTCGTTTTGAAATACTGTCACTATCAGGGTCATTCATGCCGAATGAGATTGGAGGAGCAAGGAGCAGAACAGGTGGGATGAGTGTCTCTTTAGCAAGTCCTGATGGGCGTGTTGTCGGTGGTGGAGTAGCTGGTCTACTTGTAGCCGCAAGCCCAGTCCAGGTCGTTGTAGGAAGTTTTCTGGCGGGGAACCAACATGAGCAGACGACAAAGAAACAGAAACATGAAATGACGGTAACATATACACCTGCTGCTGCTGTTCCTATATCTACCGCTGAGCCTAAACCTCATCTCTCAACTTCCTCATCTTTCCGAGGGGATAATTGGTCTACAATGCCATCAGATACAAGGAATAAGCCAACTGACATCAATGTATCTTTGCCTGGAGGTGGGTTCTCAGTGGAAGCAGCAAGTGTATGGTGGTTTATGGATGGACTACGTTTCAGGGACCAATGCATCGGTGGAGCTGATGATGAAGATGAAAACAGTTCCACCGATGATAAGGGCCGCACTTGCATGAATGAAGATATTCCTGTAAAAGGTTATACCTTTTCTCCAGCTGCTGGAATGAATGCTCCTATATCGTGGGCTTATCCTATACAGTGGGTAGCGATGGGGCTTTTCAAATTGGTTATTGCGTCATTGATCGCAAACGCTGATAAGGGCTGGAAATTTTAA 1251 0.4836 METRDGVTSGVTVVGSDAPSEYHVAPRTENTTQIVGSTMTPAAPAAQVSGQPPQSAAVTTMPAKKKRGRPRKYGPDGSVTVALSPKPISSSAPLPSVIDFSAEKRGKVRPASSVSKPKFEVENIGEWVACSVGTNFTPHIITVNAGEDVTMKVISFSQQGPRTICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNEIGGARSRTGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFLAGNQHEQTTKKQKHEMTVTYTPAAAVPISTAEPKPHLSTSSSFRGDNWSTMPSDTRNKPTDINVSLPGGGFSVEAASVWWFMDGLRFRDQCIGGADDEDENSSTDDKGRTCMNEDIPVKGYTFSPAAGMNAPISWAYPIQWVAMGLFKLVIASLIANADKGWKF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01217 416 MobiDBLite consensus disorder prediction 43 58 - -
Pte14g01217 416 MobiDBLite consensus disorder prediction 1 15 - -
Pte14g01217 416 Pfam Plants and Prokaryotes Conserved (PCC) domain 138 251 IPR005175 -
Pte14g01217 416 ProSiteProfiles PPC domain profile profile. 133 273 IPR005175 -
Pte14g01217 416 FunFam AT-hook motif nuclear-localized protein 1-like 138 269 - -
Pte14g01217 416 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 305 IPR039605 GO:0003680
Pte14g01217 416 CDD DUF296 137 228 IPR005175 -
Pte14g01217 416 SUPERFAMILY AF0104/ALDC/Ptd012-like 135 256 - -
Pte14g01217 416 MobiDBLite consensus disorder prediction 285 314 - -
Pte14g01217 416 MobiDBLite consensus disorder prediction 1 26 - -
Pte14g01217 416 MobiDBLite consensus disorder prediction 283 314 - -
Pte14g01217 416 Gene3D - 138 273 - -
Pte14g01217 416 MobiDBLite consensus disorder prediction 43 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01217 Pte-Chr14 33505504 33512310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01217 6 318 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 62.865 4.12e-127 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01217 - - qsa:O6P43_024280 479.559