Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01199 ATGGGTTGCTTTTACTGGTCTTCACCAACTGAACCTGGGCAACAGCAACCTAACGTCACGAAGAACCCTAAACCTGAGGGATGGACTGAGTTTACAAGAGAGGACAAAGCCAACAAGAGTATAGATACGATCCAAAGTGCATGGGCTGTTAGGTTGTCAATCCATCGATCAATCAAGCAATCGACCAAACTTCAATCAAGTTTTATAAGACAGAAAAAGGGTCAACTAGAAATGTTCTCCTCTTCCACTAGCTTGTCGTTGGACCACCACCCTCAATCCGAGCAACTCTGTTATGTTCATTGCAATATCTGTGACACTGTACTCGCGGTAAGTGTTCCTTGCACCAGTTTATTCAAAACTGTGACAGTTCGATGTGGCCATTGCGCGAACCTTCTACCCGTGAATATGCGTGGATTGCTTCTATCGTCAACAAATCAATTTCATTTGGGTCACACTTTCTTCTCTCCATCCCATAACTTTCTGGACGAAATACCAAATGTATCCCCTAATTACTTAATGAGCCAGACTGGAGGAAATGAATTCAATATCAATGTGACAGCCCCAGCTAATATTCCCGACCAGTTTCCAAGGCCACCGGTCATTAACAGACCTCCAGAGAAGAGACAGCGAGTCCCCTCAGCATACAATCGCTTTATTAAGGAAGAGATCCAGCGCATTAAATCTGTCGACCCTGATATAAGTCATAGAGAAGCATTCAGCGCTGCTGCTAAGAATTGGGCTCACTTCCCACACATCCACTTTGGCCTTATGCACGATCAGGCAGTGAAGAAGACTTGTGTGAGCCAGCAGGAGCAGAAAACTGGAGAAGATGTTTTGATGAAAGATGGGCATTTGGCTTCGGCCAATGTGGGCATTTCTCCCTACTAA 888 0.4493 MGCFYWSSPTEPGQQQPNVTKNPKPEGWTEFTREDKANKSIDTIQSAWAVRLSIHRSIKQSTKLQSSFIRQKKGQLEMFSSSTSLSLDHHPQSEQLCYVHCNICDTVLAVSVPCTSLFKTVTVRCGHCANLLPVNMRGLLLSSTNQFHLGHTFFSPSHNFLDEIPNVSPNYLMSQTGGNEFNINVTAPANIPDQFPRPPVINRPPEKRQRVPSAYNRFIKEEIQRIKSVDPDISHREAFSAAAKNWAHFPHIHFGLMHDQAVKKTCVSQQEQKTGEDVLMKDGHLASANVGISPY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01199 295 MobiDBLite consensus disorder prediction 8 25 - -
Pte14g01199 295 SUPERFAMILY HMG-box 199 249 IPR036910 -
Pte14g01199 295 Gene3D High mobility group box domain 201 276 IPR036910 -
Pte14g01199 295 PANTHER PROTEIN YABBY 6-RELATED 88 266 IPR006780 GO:0007275
Pte14g01199 295 CDD HMG-box_SF 210 246 - -
Pte14g01199 295 MobiDBLite consensus disorder prediction 1 25 - -
Pte14g01199 295 Pfam YABBY protein 92 256 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01199 Pte-Chr14 33379530 33382690 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01199 93 257 C2C2-YABBY Transcription Factor Family AT2G26580 51.765 1.64e-54 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Pte14g01199 YABBY 4.1e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01199 K25796 - cave:132176469 353.214