Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01174 ATGGACAGGCACAAATGCAAGCTTTGCTTCAAGACTTTTGCAAATGGAAGAGGATTGGGTGGTCACATGAAGGTTCATCTGGCAAACGTGCCTAGATTCCATGGGCACCGCAGCGAGTCAACTCCATCGGGATCTTCCTTTTCTTCTGGGGAAGAAGATGAGAGTGAAGGCGAAGAGGAAGTGGAAAGGCACGTACAAGGAGAGGAAAAAGCTTTGGTTTATGCATTGAGAGAGAATCCCAAGAGAAGTTTCAGACTTGCAGATCCTGAGTTTTCTTTTGCAGATGATGTGGATGGTGGTGCTGTGGTCCAGGACAGAGAGAGTGAGACTGAATCAAAGAACCCAACTCGTAGACGAACCAAGAGGAATCGAGGGAAACCAGATACCATGGGCATATCAGAACTGAAGGAGATCAACGGGAACATGGTACTGAAGAAGCCCAGAATGGAAAACGGGAGTTTTTCAGAGTCACCATCGGAGCCAGAACCCGTGAGCTCTGTGTCTTACAGTTCCCCTGAAGAAGATGTTGCTATGTGCCTCATGATGCTTTCTAGGGACACGTGGAGTAGAAATATCGAGGAGCAAGATCACGTTGAACAAGAAGTTCAAACATTTGAGAAGAAACGAAGAGGACCAAAGGATGACCCAAAATCCAAAAGGATTCGAGGAAAGCATCAGTGTGGGAACTGCAGGAAAACATTTAGATCCTCCCGTGCATTGAACAGTCACAAAAGGATTTGTTTTCCTGATGATGCTCTTGCAGGTAACAGCAATGAGAAAATTTTCGAATGCCCATTCTGTTTCCAATTGTTTGGGTCAGGACAAGCGCTTGGAGGACATAAGAGATCTCATCTTATTGGCCTTTCATCGAATACTGCTGCTCCCACTTCTTCTAAAAAAAAAAAGACTTTCTTAGATCTCAACTTGCCTGCTCCAGCTGAAGACGATGACTTGAGTGTGGTTTCTGAATCATAG 975 0.4523 MDRHKCKLCFKTFANGRGLGGHMKVHLANVPRFHGHRSESTPSGSSFSSGEEDESEGEEEVERHVQGEEKALVYALRENPKRSFRLADPEFSFADDVDGGAVVQDRESETESKNPTRRRTKRNRGKPDTMGISELKEINGNMVLKKPRMENGSFSESPSEPEPVSSVSYSSPEEDVAMCLMMLSRDTWSRNIEEQDHVEQEVQTFEKKRRGPKDDPKSKRIRGKHQCGNCRKTFRSSRALNSHKRICFPDDALAGNSNEKIFECPFCFQLFGSGQALGGHKRSHLIGLSSNTAAPTSSKKKKTFLDLNLPAPAEDDDLSVVSES* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01174 324 ProSiteProfiles Zinc finger C2H2 type domain profile. 225 246 IPR013087 -
Pte14g01174 324 SMART c2h2final6 4 26 IPR013087 -
Pte14g01174 324 SMART c2h2final6 225 245 IPR013087 -
Pte14g01174 324 SMART c2h2final6 262 284 IPR013087 -
Pte14g01174 324 MobiDBLite consensus disorder prediction 194 225 - -
Pte14g01174 324 SUPERFAMILY beta-beta-alpha zinc fingers 225 284 IPR036236 -
Pte14g01174 324 ProSiteProfiles Zinc finger C2H2 type domain profile. 262 284 IPR013087 -
Pte14g01174 324 ProSiteProfiles Zinc finger C2H2 type domain profile. 4 31 IPR013087 -
Pte14g01174 324 Gene3D Classic Zinc Finger 222 284 - -
Pte14g01174 324 MobiDBLite consensus disorder prediction 95 131 - -
Pte14g01174 324 MobiDBLite consensus disorder prediction 34 67 - -
Pte14g01174 324 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 1 323 IPR044303 GO:0006355
Pte14g01174 324 MobiDBLite consensus disorder prediction 148 169 - -
Pte14g01174 324 MobiDBLite consensus disorder prediction 100 116 - -
Pte14g01174 324 MobiDBLite consensus disorder prediction 194 222 - -
Pte14g01174 324 Pfam C2H2-type zinc finger 3 27 - -
Pte14g01174 324 Pfam C2H2-type zinc finger 262 285 - -
Pte14g01174 324 MobiDBLite consensus disorder prediction 152 169 - -
Pte14g01174 324 ProSitePatterns Zinc finger C2H2 type domain signature. 6 26 IPR013087 -
Pte14g01174 324 MobiDBLite consensus disorder prediction 36 50 - -
Pte14g01174 324 ProSitePatterns Zinc finger C2H2 type domain signature. 264 284 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01174 Pte-Chr14 33076259 33077339 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01174 1 321 C2H2 Transcription Factor Family AT3G60580 33.918 2.18e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte14g01174 zf-C2H2_6 2e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01174 - - jre:108989911 291.967