Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01160 ATGGCACCTAGAACCAGTGCTTCTACTAAGAAAGCCACAAATAAAGGAGCATGGACAGCAGAGGAAGATCGACAACTTGCTCAATACGTCGCTTCTCGTGGTGCAAATGGGTGGAAGACAATCGCAGCTGAATCAGGTCTGAACAGATGTGGCAAGAGTTGCAGATTGAGATGGTTGAATTACCTGAGGCCTAACATAAAAAGAGGCAACATATCAGATGAAGAAGAGGACCTCATACTCAGACTTCACAAGCTACTTGGCAACAGGTGGTCCCTTATAGCAGGCAGACTTCCAGGGCGTACGGACAACGAAATCAAGAACTACTGGAATTCTCATTTGAGCAAGAAAGCAAAAAGCAAAGAGGAAGGAGTAGGAAGTTCAATAGTAACAGAAGCGGAAACCGCAGCGCAGAGTACTACTAGCGACAGTCCTCAACTGGGCAGTGAGACTGCCAGTATAAATGGGAACATGGGCACTGACTTTGATGCGGATGATTTCTTTGATTTCTCTTCTGAAGGATCTCATGGACTGGACTGGATAAACAAGTTTCTTGAAATGGATGGCAATCCTTGA 573 0.4538 MAPRTSASTKKATNKGAWTAEEDRQLAQYVASRGANGWKTIAAESGLNRCGKSCRLRWLNYLRPNIKRGNISDEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKAKSKEEGVGSSIVTEAETAAQSTTSDSPQLGSETASINGNMGTDFDADDFFDFSSEGSHGLDWINKFLEMDGNP* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01160 190 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 4 141 - -
Pte14g01160 190 Gene3D - 7 68 - -
Pte14g01160 190 Gene3D - 71 142 - -
Pte14g01160 190 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pte14g01160 190 SUPERFAMILY Homeodomain-like 14 109 IPR009057 -
Pte14g01160 190 CDD SANT 72 113 IPR001005 -
Pte14g01160 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pte14g01160 190 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pte14g01160 190 FunFam MYB-related transcription factor 14 67 - -
Pte14g01160 190 SMART sant 14 64 IPR001005 -
Pte14g01160 190 SMART sant 67 115 IPR001005 -
Pte14g01160 190 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Pte14g01160 190 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pte14g01160 190 CDD SANT 17 62 IPR001005 -
Pte14g01160 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Pte14g01160 190 MobiDBLite consensus disorder prediction 132 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01160 Pte-Chr14 32976947 32978040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01160 15 145 MYB Transcription Factor Family AT5G40330 57.778 6.06e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte14g01160 Myb_DNA-binding 6.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01160 K09422 - qsa:O6P43_034075 265.003