Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01154 ATGATGGTTGATAAAGAAGATTTGAGGTTGAGTCTGAGTCTGGGCTTTCATCAGAATCAGCATCATCCCCATTTTCCGCTGAATCTGATGCCATCTGCTCCGGTTGTGAACAATCTCTCTTGGAACGAGGCCTTGTTTCCATCAGATCGAAACTCGGAATCTTGCCGTAACACAGAGCCGCGATCTTTCCTGCGTGGGATCGACGTGAATCGGTTGCCGTCTACGGTTGACTGTGAAGAGGAAGCCGGCCTTTCATCGCCGAACAGCACGTTATCCAGTGTGAGTGGCAAGCGATGTGAGAGGGAGGTCCTCGGAGACGAACTTGACACAGAAAGAGCTTCATCAAGAGGAATCAGCGATGAAGAAGACGGTGAGAACTCTAGAAAAAAGCTCAGACTCACTAAAGACCAGTCCGCTATTCTTGAAGAGAACTTTAAAGAACACAACACTCTGAACCCCAAGCAAAAGATGGCATTGGCGAAGCAGTTAGGTCTAAGGCCCAGACAAGTGGAGGTGTGGTTTCAGAACAGAAGGGCAAGAACCAAGTTGAAGCAAACTGAGGTTGATTGCGAATTCTTGAAGAGGTGCTGTGAGAATCTGACGGAGGAAAACAGACGATTGCAGAAGGAAGTGCAAGAGCTGAGAGCACTGAAACTTTCCCCACAGTTCTACATGCACATGACCCCACCCACCACTCTCACTATGTGCCCTTCATGTGAGAGAGTCGGAGATCTACCTTCCACGTCATCAAACGCTGAGCATAGCCGTACTCACCAACTGGGCCCAAGGCCTGTGCCGATGAACGCGTGGGCCACACCAGCGGGCCAGATTGGTTACCGGCCGTTCGATGCCCTCCGTCCTAGATCGTGA 870 0.5057 MMVDKEDLRLSLSLGFHQNQHHPHFPLNLMPSAPVVNNLSWNEALFPSDRNSESCRNTEPRSFLRGIDVNRLPSTVDCEEEAGLSSPNSTLSSVSGKRCEREVLGDELDTERASSRGISDEEDGENSRKKLRLTKDQSAILEENFKEHNTLNPKQKMALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELRALKLSPQFYMHMTPPTTLTMCPSCERVGDLPSTSSNAEHSRTHQLGPRPVPMNAWATPAGQIGYRPFDALRPRS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01154 289 ProSiteProfiles 'Homeobox' domain profile. 124 184 IPR001356 GO:0003677
Pte14g01154 289 PRINTS Lambda-repressor HTH signature 164 180 IPR000047 GO:0003677
Pte14g01154 289 PRINTS Lambda-repressor HTH signature 155 164 IPR000047 GO:0003677
Pte14g01154 289 Gene3D - 132 182 - -
Pte14g01154 289 SMART halz 184 227 IPR003106 GO:0006355|GO:0043565
Pte14g01154 289 SUPERFAMILY Homeodomain-like 119 185 IPR009057 -
Pte14g01154 289 Pfam Homeobox associated leucine zipper 184 218 IPR003106 GO:0006355|GO:0043565
Pte14g01154 289 Coils Coil 183 220 - -
Pte14g01154 289 MobiDBLite consensus disorder prediction 79 132 - -
Pte14g01154 289 MobiDBLite consensus disorder prediction 81 96 - -
Pte14g01154 289 Pfam Homeodomain 128 182 IPR001356 GO:0003677
Pte14g01154 289 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 8 256 - -
Pte14g01154 289 SMART HOX_1 126 188 IPR001356 GO:0003677
Pte14g01154 289 CDD homeodomain 128 185 IPR001356 GO:0003677
Pte14g01154 289 ProSitePatterns 'Homeobox' domain signature. 159 182 IPR017970 GO:0000981|GO:0006355
Pte14g01154 289 FunFam Homeobox-leucine zipper protein 18 113 189 - -
Pte14g01154 289 MobiDBLite consensus disorder prediction 244 266 - -
Pte14g01154 289 MobiDBLite consensus disorder prediction 99 132 - -
Pte14g01154 289 Pfam HD-ZIP protein N terminus 2 102 IPR006712 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01154 Pte-Chr14 32941626 32943623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01154 1 290 Homeobox Transcription Factor Family AT5G47370 61.564 2.86e-114 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte14g01154 HD-ZIP_N 4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01154 K09338 - qsa:O6P43_024378 422.165