Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01147 ATGTCTGAGCAGAGTAATATGGAGTCAGACATGGCGCTTCTTGAATCAATTAGTCTCTATTTGCTTGGAGAATCCGATGGTAGATTCGAAGCTCCGAGTAGTATGAGCTCTATTGGTAATGGTCCAGTGTATTGCCGGAGCTCAAGCTTCAGTAGCTTGTATCCTTGCCTAACTGAGAGTTGGGGAGATTTGCCACTCAAAGAAGACGACTCTGAAGACATGTTTCTATATGGGGTGCTTCGTGATGCAGTAAACGTTGGCTGGGTTCCCTCGCTTGCTTCCGGGACAACGAAATTGAGGTTAACCCCAATTTCAACTGTCAAATCCGAGCCGGATTTTTCGCCGACCGTGAGCAGTCCCGCAGAGAGCGTGGTGGCTCCTGTGGTAGTTCAGCAGAAAAAGGTTGCTCCTGCGAAAGGGAAGCATTACAGAGGGGTGAGACAACGGCCTTGGGGGAAATTCGCGGCGGAGATCCGTGACCCGGCTAAAAACGGTGCGAGAGTTTGGCTTGGAACCTTCGAAACAGCGGAGGACGCTGCCCTGGCTTATGACAGAGCCGCCTACAGAATGCGCGGGTCTCGGGCTCTGCTAAACTTCCCACTCCGAGTGAATTCGGGCGAACCCGACCCAGTAAGAGTGACGTCGAAACGGTCCTCCCCGGAGTCATCTTCTTCCTCTTCAGAAAGTGGATCACCTAAAAGAAAGAAGAAAATGGCTACAGGGACAATGGGGCAAGTGGGGACGGTTCAAAAAACCGGGATGCAAATGGATCAAGTAGCATCCTGTACACATGGAGGACAGCTACTCGTTACTTAG 816 0.5123 MSEQSNMESDMALLESISLYLLGESDGRFEAPSSMSSIGNGPVYCRSSSFSSLYPCLTESWGDLPLKEDDSEDMFLYGVLRDAVNVGWVPSLASGTTKLRLTPISTVKSEPDFSPTVSSPAESVVAPVVVQQKKVAPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPESSSSSSESGSPKRKKKMATGTMGQVGTVQKTGMQMDQVASCTHGGQLLVT* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01147 271 MobiDBLite consensus disorder prediction 211 229 - -
Pte14g01147 271 PRINTS Ethylene responsive element binding protein signature 166 182 IPR001471 GO:0003700|GO:0006355
Pte14g01147 271 PRINTS Ethylene responsive element binding protein signature 143 154 IPR001471 GO:0003700|GO:0006355
Pte14g01147 271 PANTHER DNA-BINDING DOMAIN 120 236 IPR044808 GO:0003700|GO:0009873
Pte14g01147 271 MobiDBLite consensus disorder prediction 203 244 - -
Pte14g01147 271 CDD AP2 141 200 IPR001471 GO:0003700|GO:0006355
Pte14g01147 271 Gene3D AP2/ERF domain 141 203 IPR036955 GO:0003700|GO:0006355
Pte14g01147 271 FunFam Ethylene-responsive transcription factor 2 141 201 - -
Pte14g01147 271 SUPERFAMILY DNA-binding domain 142 202 IPR016177 GO:0003677
Pte14g01147 271 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Pte14g01147 271 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Pte14g01147 271 Pfam AP2 domain 142 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01147 Pte-Chr14 32897174 32899401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01147 1 270 AP2-EREBP Transcription Factor Family AT4G17500 55.914 2.59e-89 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pte14g01147 AP2 1.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01147 K09286 - qsa:O6P43_024387 313.923