Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01133 ATGGGAAAACAAGGTCCTTGCTATCACTGTGGAGTTACTAACACACCCTTATGGCGCAATGGACCAGCAGACAAGCCTGTACTATGCAATGCATGTGGATCTCGATGGAGGACAAAGGGAACACTTGCAAACTATACGCCTTTACATGCTCGGGCAGAATCAGATGATTATGACGATCATAATATTTCCAGGGTTAAAAGTATATCTATTAATAAGCACAGAGAAGCGAAATTACTAAAACGAAAACAGACTCATGACAATGTAGTATCTGGAGGGGTTGCAACTGATTACAACCAGGGATTTCGGAGGGTTGTTGATGAAGATACCGCTAATAGATCAAGTTCAGGATCGGCCATATCAAGCTCTGACAGCTATGCTCAAATTGGCAGCACAGATGCTAGTGATTTCACAGGTCCTGCTCAATCAGTTGTATGGGATGCAATGGTGCCTTCAAAGAAGAGGACATGTGTAAGCCGTCCAAAACAATCTGCGGTTGAGAAGCTCACTAAAGATTTATGTACAATTTTACATGAACAGCAGTCTTACTTCTCTGCATCGTCTGAAGATGATCTACTTTTTGAAAGTGAAACCCCTCTGGTCTCCGTCGAGATAGGACATGGAACTGTTCTCATTCGACACCCAAGTTCAATAGCTCGAGAAGAAGAATCTGAAGCAAGCTCTCTTTCAGTTGATAAGCATTGCCAAACAAGTGAGGCTTATTCCTATGTTGGTGGAATTACTGAACATACTGAGAAGAAGGATATAAAATTTCCAACTTATGAGTTTGAAAAGATCAGGAATGCCACTGAGGGAGGGATGCAGCTGGAGCAACACAAAAGGAACAAGTCTCAGCTAGAAAAAATACAAATCCTTGGGAACCATAATTCTCCATTGCTATCTGTAGACTTAAATGAATTTGTAAATTATGAGGAGTTTATGAAACACTTGACAAGAGAAGAGCAACAACAATTACTCAAGTATCTTCCTCCGGTGGATACAGTGAAACTGCCTGAGAGCCTCAAAAACATGTTTGATAGCTCTCAATTCAAGGAGAACTTAAACGACTTTCAACACCTTATTGCAGAAGGTGTTTGGGATGTCTCCATTGTCGGGGCAAAACCTGAGGATTACAGAACTCTGAAAAGGCTTGCATTGACCCATTTTTCAAAATCAAAATGGGTTGGACACTATAATTCACTCAAGGGTTGTAAAAGTAGCATAATGAAGTCTGTTGTTCAAGAGTCCCCTGCTACTGCGTCAAGCGATGTCATCTATGCCAAAAGGTTTAATGATGGCCAAGACCAGAGGTTTGCAGAAGGGAGGACATCCTTGAAGAGTTCCCAAAGGGCAATGATGAAGTCTAGTGCTGAGGGAAAGGAAGTGGTTGAAGGTGGTTCTTTATTCAGTCCAAGAAGCTTATTTGCTTTGCCAGCTGACAGGAGCGCTCTCATGTTAAATTCTTTCAGTATTGTTGAGGAAAGTTCTGATCAAGATCTGCTGCTGGAGGTGCCATCCAATGGTGCTTTCCCTGAGGCAAAACTCTTGCACCCATCTTTAATCTTCGGTGCACAGGCTAGTACTAGTAGTAGCTCCATACATCCCAATCTCCGTCCTTGA 1617 0.4224 MGKQGPCYHCGVTNTPLWRNGPADKPVLCNACGSRWRTKGTLANYTPLHARAESDDYDDHNISRVKSISINKHREAKLLKRKQTHDNVVSGGVATDYNQGFRRVVDEDTANRSSSGSAISSSDSYAQIGSTDASDFTGPAQSVVWDAMVPSKKRTCVSRPKQSAVEKLTKDLCTILHEQQSYFSASSEDDLLFESETPLVSVEIGHGTVLIRHPSSIAREEESEASSLSVDKHCQTSEAYSYVGGITEHTEKKDIKFPTYEFEKIRNATEGGMQLEQHKRNKSQLEKIQILGNHNSPLLSVDLNEFVNYEEFMKHLTREEQQQLLKYLPPVDTVKLPESLKNMFDSSQFKENLNDFQHLIAEGVWDVSIVGAKPEDYRTLKRLALTHFSKSKWVGHYNSLKGCKSSIMKSVVQESPATASSDVIYAKRFNDGQDQRFAEGRTSLKSSQRAMMKSSAEGKEVVEGGSLFSPRSLFALPADRSALMLNSFSIVEESSDQDLLLEVPSNGAFPEAKLLHPSLIFGAQASTSSSSIHPNLRP* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01133 538 Gene3D - 283 390 IPR038108 -
Pte14g01133 538 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Pte14g01133 538 Gene3D - 3 87 IPR013088 GO:0006355|GO:0008270
Pte14g01133 538 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 45 - -
Pte14g01133 538 CDD ZnF_GATA 6 54 IPR000679 GO:0006355|GO:0043565
Pte14g01133 538 PANTHER OSJNBB0038F03.10 PROTEIN 1 531 IPR044589 -
Pte14g01133 538 Pfam Asx homology domain 277 366 IPR028020 -
Pte14g01133 538 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Pte14g01133 538 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 294 406 IPR044867 -
Pte14g01133 538 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01133 Pte-Chr14 32802944 32807308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01133 1 516 C2C2-Gata Transcription Factor Family AT4G17570 51.136 3.48e-153 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte14g01133 ASXH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01133 - - qsa:O6P43_024409 723.005