Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01131 ATGGAGATTATGCCTAGGAACCAATATGGGCTTGTTTGCTTCTTGTTGCTCTTGCCAGCACTATGCACATCTCAAGACACATTTACACCATCTAGAGCAACTTTTTACGGCAGTCCTGATTGCTATGGCACCCCAACTGGAGCTTGTGGTTTTGGCGATTATGGAAAGACAATTTATGATGGAAACGTTGCAGCAGTTTCTAGACTTTACAGAAATGGAACAGGATGTGGTGCATGCTATCAGGTTAGGTGCACAAACCCACAATACTGTGATGGGTATGGAGCTTATGTAGTGGTGACTGACTATGGTGAAGGAGACAGGACAGACTTCATCCTTAGCCCTCGGGCATACTCAAAGCTGGGACGCGACAAGGATACAACAGCAGCGATATTCAAGTATGGTGTGGTTGATGTAGAATACAGAAGGATTTCCTGCAGATACGCTGGCTATAACATCAAATTCAAGGTCCTTGAGAACAGCAAATACCCTAATTACTTGGCCTTAGTCATTCTGTATGTTGGTGGTAAAAATGACATCACTGCAGTTCAGTTCTGGCAGGAGGATTACCGCCAATGGAGGCCAATGCGTCAAGCCTTTGGTGCAGTTTGGGATATAGCCAACCCTCCTGCTGGTGAGCTCACCTTGAGGTTTCAAGTGAGTGGAAAAGTAGGAGTGTACTGGGTACGGTCAGCAAAACCCATCCCAAGTGACTGGAAGATTGGAGCCGATTATGACACAGAAATTCAGCTTAATTGA 756 0.455 MEIMPRNQYGLVCFLLLLPALCTSQDTFTPSRATFYGSPDCYGTPTGACGFGDYGKTIYDGNVAAVSRLYRNGTGCGACYQVRCTNPQYCDGYGAYVVVTDYGEGDRTDFILSPRAYSKLGRDKDTTAAIFKYGVVDVEYRRISCRYAGYNIKFKVLENSKYPNYLALVILYVGGKNDITAVQFWQEDYRQWRPMRQAFGAVWDIANPPAGELTLRFQVSGKVGVYWVRSAKPIPSDWKIGADYDTEIQLN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01131 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Pte14g01131 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Pte14g01131 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Pte14g01131 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Pte14g01131 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Pte14g01131 251 Gene3D - 146 247 IPR036749 -
Pte14g01131 251 SUPERFAMILY Barwin-like endoglucanases 13 149 IPR036908 -
Pte14g01131 251 CDD DPBB_EXLB_N 31 145 - -
Pte14g01131 251 Gene3D - 19 145 IPR036908 -
Pte14g01131 251 SMART dpbb_1 63 140 IPR007112 -
Pte14g01131 251 Pfam Expansin C-terminal domain 152 222 IPR007117 -
Pte14g01131 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Pte14g01131 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Pte14g01131 251 Pfam Lytic transglycolase 64 140 IPR009009 -
Pte14g01131 251 PANTHER EXPANSIN-B3 18 249 - -
Pte14g01131 251 SUPERFAMILY PHL pollen allergen 151 245 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01131 Pte-Chr14 32785204 32787030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01131 11 252 Expansin Gene Family AT4G17030 56.790 2.63e-97 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01131 - - qsa:O6P43_034031 382.104