Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01130 ATGCATCAGCATCAGATATTAACTTCTAATCCAAGAAATCCACTCGCCGTTGTTATTATCTTGGTGCTCTTACCTGTATTATGCCATTCAGAAGACACGTTTACCCCTTCTAGAGCAACCTACTATGGCAGCCCTGACTGTTACGGGACACCAACTGGTGCCTGTGGTTATGGTGAAGATGGAAGGACCGCCAACGACGGTAACGTTGCTGCAGTCTCTAACAATCTGTTCAGGAATGGAACTGGCTGCGGTGCATGCTATCAGGTAAGATGCATGAACCCACAATACTGTGATGAGACAGGAGCCTATGTAGCGGTGACAGACCATGGAGAAGGAGACAGAACAGACTTCATTCTAAGTCCACGTGCCTTCGCTAAATTGGGACAAGATGACGACACATCCACTGAGCTTTTCAAGTGTGGTGTGGTTGAAATAGAATACCGAAGGGTTCCATGCCAATCATCCTCCTATACCCTTGCAATGAAAGTTCATCCACACAGCAAATACCCAGAGTACTTGGCCATAGCTATTCTCTTCGTTTATGGAGAGAACGATGTCACTGCAGTGGAACTCTGGCAGGAGGATTGCAAAGAATGGAGACCCTTACGAAGAGCCTATGGAGCTGTGTGGGACATTCCTAACCCTCCTCGCAATGGAATTACTCTGAGGTACCAAATCAGTGGCAGTGTAGGGACGACTTGGGTTCAATCTGAAAATGTGTTGAATGGACAATGGAAGATTGGAACAACGTACTATGTTCAAGCTTAA 768 0.4635 MHQHQILTSNPRNPLAVVIILVLLPVLCHSEDTFTPSRATYYGSPDCYGTPTGACGYGEDGRTANDGNVAAVSNNLFRNGTGCGACYQVRCMNPQYCDETGAYVAVTDHGEGDRTDFILSPRAFAKLGQDDDTSTELFKCGVVEIEYRRVPCQSSSYTLAMKVHPHSKYPEYLAIAILFVYGENDVTAVELWQEDCKEWRPLRRAYGAVWDIPNPPRNGITLRYQISGSVGTTWVQSENVLNGQWKIGTTYYVQA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01130 255 Gene3D - 26 152 IPR036908 -
Pte14g01130 255 CDD DPBB_EXLB_N 37 152 - -
Pte14g01130 255 PRINTS Expansin/Lol pI family signature 199 213 IPR007118 GO:0005576
Pte14g01130 255 PRINTS Expansin/Lol pI family signature 239 253 IPR007118 GO:0005576
Pte14g01130 255 PRINTS Expansin/Lol pI family signature 140 156 IPR007118 GO:0005576
Pte14g01130 255 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Pte14g01130 255 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Pte14g01130 255 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Pte14g01130 255 PANTHER EXPANSIN-B3 21 252 - -
Pte14g01130 255 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 157 IPR007112 -
Pte14g01130 255 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 171 253 IPR007117 -
Pte14g01130 255 SUPERFAMILY PHL pollen allergen 160 251 IPR036749 -
Pte14g01130 255 Pfam Expansin C-terminal domain 160 240 IPR007117 -
Pte14g01130 255 SUPERFAMILY Barwin-like endoglucanases 20 154 IPR036908 -
Pte14g01130 255 Pfam Lytic transglycolase 70 147 IPR009009 -
Pte14g01130 255 Gene3D - 153 253 IPR036749 -
Pte14g01130 255 SMART dpbb_1 69 147 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01130 Pte-Chr14 32780245 32781820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01130 2 251 Expansin Gene Family AT4G17030 53.600 8.12e-95 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01130 - - qsa:O6P43_024411 351.673