Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01124 ATGTCACTGTCTATCTCACCTCAGCTTCAGCCTCAACCTGAACCTGAAGCTGAACCTGTCTCCATCGACATGAGCACAATCTCTCCTTCTCCAACCTCGCACCGTAAGTTCCCACCGCCCTGTTGGACGCACGAAGAATCAGTGGCACTCATCGAGGTCTACCGTCACAAGTGGTTCTCTCTCCGCCGCACCAACCTTCGGTCTAACGACTGGGAATCTGTCGCTGCAGATGTAGCTCGCCGTTGCCCTCTTGTACCTTCCCCCAAGTCTTCTGTACAGTGCCGTCACAAGATGGATAAACTACGCAAGCGTTACCGTGAAGAGAAGCAACGTGCTCTTGCACACCCTGATCAGTTCTTCACCTCTTGGGTCCTTTTCCATCTTATGGATTCTCTGGAAAATGATAGGTCTTCTAGTTTCTCTACCCTATCCGACACTCGAAATAGCTCTTCTCCTATCACAGGGATCAAGAGGAAAGCCTCCGGTTATCTTTTGGGTACGGTCCCTTCTTCAAGATTCAGAGAAAGAAATACACTTTATCGGAAAGCTGTAGACTTTGAGTTTGATTCGAGGGATCATGATTTGGATGAGGGTTCGGATGATACTCCATGTCATTTAGAAGCTGATGGGTTGGTCTTACATACCCATGAGTGTAATATTGGTCTGTTGTCCTTACACAAGAGAATTGGCCCCAAGAATGACGAAGAAAATTTCAGGTTGGGAGATGGGTTCCCTGTTAGTACCTTCGGCGACAGGATTTCTCCTCAGCCTTGTTCTGTATCTAAGGTTCGGGTGAAAGTTGAGGGTTCTGGCGCCAAAACCGACAGCGTTGTGTTTCCCGCCAGACCCCTTGGTAATGCTAGTCGGAAATTTATGTCTGTCGGGTTCAATTTCAAGAATAGTCGAGAAATTGATGGGAATTCATATTCAGGGGCATCTGAATTTGAGAAGAAGAGGAGGAGCGACCATAGAAGTGAGAGAAGTGACGACTCGGCTGCAGATATTTTGTCATCCATAAACACGGTAGGAGAAGAGCTCCTTAAGTTGGAGAAGATGAAGATAGAAATGGCTCAGGAGATTGAGAAAAGAAGAATGAAGATGGAGATGAAGCACACTGAATTGGTTCTTCAATTGCAGCTGCAGATTGTGGATTCTTTTGCAAAAGCGTTGTTTTGA 1176 0.466 MSLSISPQLQPQPEPEAEPVSIDMSTISPSPTSHRKFPPPCWTHEESVALIEVYRHKWFSLRRTNLRSNDWESVAADVARRCPLVPSPKSSVQCRHKMDKLRKRYREEKQRALAHPDQFFTSWVLFHLMDSLENDRSSSFSTLSDTRNSSSPITGIKRKASGYLLGTVPSSRFRERNTLYRKAVDFEFDSRDHDLDEGSDDTPCHLEADGLVLHTHECNIGLLSLHKRIGPKNDEENFRLGDGFPVSTFGDRISPQPCSVSKVRVKVEGSGAKTDSVVFPARPLGNASRKFMSVGFNFKNSREIDGNSYSGASEFEKKRRSDHRSERSDDSAADILSSINTVGEELLKLEKMKIEMAQEIEKRRMKMEMKHTELVLQLQLQIVDSFAKALF* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01124 391 FunFam Trihelix transcription factor ASIL2 42 107 - -
Pte14g01124 391 Gene3D - 42 107 - -
Pte14g01124 391 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 388 IPR044823 -
Pte14g01124 391 SMART 118neu2 49 137 IPR006578 -
Pte14g01124 391 ProSiteProfiles Myb-like domain profile. 42 102 IPR001005 -
Pte14g01124 391 MobiDBLite consensus disorder prediction 1 38 - -
Pte14g01124 391 Pfam Myb/SANT-like DNA-binding domain 40 132 IPR044822 -
Pte14g01124 391 MobiDBLite consensus disorder prediction 312 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01124 Pte-Chr14 32749849 32751024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01124 41 167 Trihelix Transcription Factor Family AT3G14180 27.559 2.42e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte14g01124 Myb_DNA-bind_4 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01124 - - qsa:O6P43_024420 237.654