Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01110 ATGAACAAAAACCAAATCGAGAAGGTTATTCCTTGGCCTGGATTCCCCACATCAAAAGCTCTTAGTAATTTTGGCGATGCAAATTGCATGGAACAGTTGCTTGTCCATTGTGCTAACGCTATAGAAAGCAACGACGCTACTCTAGCTCAACAAATCCTATGGGTGCTAAACAATATCGCACACCCAGATGGTGACTCAAACCAACGCCTCACCTGTGCCTTTCTTCGCGCTCTCATCGCACGTGCAGCCAGGAGTGGTAGCTGCAAAATGCTAGCTGCCATGGCTAATGCTCATAGCAATATTCTTAACATAGATAACCATAGGTTCTCAGTGCTGGAGTTTGCTTATTTTGTTGACTTGACACCATGTCACCGGTTTGGTTTCACAGCAGCCAATGCAGCCATTTTAGAAGCTACCGAAGGATTCTCGGTCATTCACATCGTCGACCTCAGTTTGACACATTGCATGCAGATTCCAACTCTGATTGATGCCATTGCCAGTCGTCATGAGGTCCCCCCTCTATTGAAACTCACCATAGCAGGTGTAACCCAGGAACTCCCACCTATGGTTGACATTTCATACGATGAGTTAGGTGCAAAGTTAGTTAATTTTGCAAAGTCTAAGAATGTGACATTGGAATTCAGAGTGATTCCTTCGAGTTATACAGACGGATATGCAGCTTTACTCGATCATCTACGTGTGCACCATTTAGTTTACGCAGCAGACAGAACTGAAGCTCTAGTTATAAACTGTCACATGGCACTTCATTATATTCATGAAGAAACTTTCTCTCCGATTCCGACTACAATTTCTAGCCCTTACAACATTTTAGACTCTTTATCTGCTTGCAATTCTTCGATGAGATCGTCGTTTCTGAAAGCACTGAGAAGCTTAAACCCAACAATGGTTATTCTAGTAGATGAAGATGCAGATTTAACATCAAACAATCTGGTTTGTAGGTTAAGGACTGCATTTAACTACTTATGGATACCATATGATGCAGTAGACACGTTTCTTCCCCGGGGGAGTGAACAAAGGCAGTGGTACGAAGCTGATATTTGCTGGAAGATCGAGAATGTAATAGCAGAGGAGGGTTTTGGGAGAGTAGAGAGGCTGGAGCCAAAGAACATGTGGGTGCACCGAATGAGAAATGCAAACTTTCAAGGTGTCGCTTTTGGAGAAGATGCTATCTCTGAGGTGAAGGCAATGCTTGATGAACATGCCGCTGGGTGGGGTTTGAAGAAGGAGGATGAAGATCTTGTTCTCACATGGAAAGGGCACAACGTTTTGTTTGCCTCGGCATGGATACCTGCTTGA 1317 0.4389 MNKNQIEKVIPWPGFPTSKALSNFGDANCMEQLLVHCANAIESNDATLAQQILWVLNNIAHPDGDSNQRLTCAFLRALIARAARSGSCKMLAAMANAHSNILNIDNHRFSVLEFAYFVDLTPCHRFGFTAANAAILEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLLKLTIAGVTQELPPMVDISYDELGAKLVNFAKSKNVTLEFRVIPSSYTDGYAALLDHLRVHHLVYAADRTEALVINCHMALHYIHEETFSPIPTTISSPYNILDSLSACNSSMRSSFLKALRSLNPTMVILVDEDADLTSNNLVCRLRTAFNYLWIPYDAVDTFLPRGSEQRQWYEADICWKIENVIAEEGFGRVERLEPKNMWVHRMRNANFQGVAFGEDAISEVKAMLDEHAAGWGLKKEDEDLVLTWKGHNVLFASAWIPA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01110 438 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 30 425 IPR005202 -
Pte14g01110 438 Pfam GRAS domain family 30 435 IPR005202 -
Pte14g01110 438 ProSiteProfiles GRAS family profile. 21 436 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01110 Pte-Chr14 32658797 32660113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01110 15 437 GRAS Transcription Factor Family AT3G49950 59.016 9.00e-180 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte14g01110 GRAS 3.1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01110 - - tcc:18611261 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01110 14 32658797 32660113 Pte14g01110 14 32658797 32660113 RCT