Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01107 ATGAAATTTATAGGGATATTACGATTTGATGGCCATAAGGCCTTCGCAATTCACGGTCTCCCGCCGCAGATTATTGCTCGTTTCCTAGCCCACAAAATTCTTCTATTCGCTCCCTCTTCCTTTTCTTCTTCGGCCTCTTCTTTCTCTTGCAGTTCTGAGCACTCTCTTGTTCCGTCTTCCGTTTGCCAAATCGCTTCGTCCCCTGCCACATCGTTCTCAAATCTTGGTCATCACCGTGATCCTCAGGTAATTCCTCAGAGACATCGCCTGCGGTCATTGACGCCGCCTGAAACCCTGGCGCAGAAGATTGGGAAATCTATTCGCCGTCCTGGCGCTGTCTCCAAGGCTAGGGTTTATGCCGATGTCAACGTTGTCCGGCCGAAGGAATATTGGGACTACGAGTCTCTCACCGTCCAGTGGGGAGAGCAAGATGATTACGAGGTGGTGAGGAAGGTTGGAAGAGGGAAATACAGCGAGGTGTTTGAAGGTGTTCATTGCACGGACAATGAGAAATGTATTATCAAGATCTTAAAACCTGTGAAGAAGAAGAAGATTAAGAGGGAGATCAAAATATTGCAGAATCTTTGTGGAGGACCCAACATTGTGAAGTTACTAGACATTGTTAGAGATCACCAATCGAAGACTCCAAGCCTTATTTTTGAATATGTGAATAACGCTGACTTTAAAGTGCTGTATCCAACACTTTCAGACTATGACATACGATACTACATATATGAGCTTCTAAAGGCATTGGATTATTGTCATTCACAAGGTATTATGCACCGAGATGTAAAGCCACATAATGTAATGATTGATCATGAGCAGCGAAAACTACGCCTGATAGATTGGGGACTGGCTGAGTTCTATCATCCAGGAAAGGAATATAATGTCCGTGTTGCTTCAAGATATTTCAAAGGTCCCGAGCTGCTTGTTGATCTCCAAGACTATGATTATTCCTTAGATTTATGGAGCCTTGGTTGTATGTTTGCTGGAATGATATTCCGCAAGGAACCATTCTTTTATGGGCATGACAACTACGACCAGCTTGTAAAAATAGCCAAGGTGCTTGGAACAGATGAGATGAATTCTTATCTCAATAAGTATCTCATAGAATTGGATCCAAATCTTGCAGCACTTGTCGGAAGGCATAGCCGGAAACCCTGGTCGAAGTTTATCAATGCAGATAATCAGCATTTGGCTGTTCCAGAGGCTATTGATTTTGTGGACAAGTTACTACGATACGATCATCAAGAAAGGCCAACTGCTAAAGAAGCAATGGCACATCCTTACTTCAACCCAATCAGAAATGCGGAAAACAGTAGAGAACGTGGCCATTGA 1338 0.4357 MKFIGILRFDGHKAFAIHGLPPQIIARFLAHKILLFAPSSFSSSASSFSCSSEHSLVPSSVCQIASSPATSFSNLGHHRDPQVIPQRHRLRSLTPPETLAQKIGKSIRRPGAVSKARVYADVNVVRPKEYWDYESLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDHQSKTPSLIFEYVNNADFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDEMNSYLNKYLIELDPNLAALVGRHSRKPWSKFINADNQHLAVPEAIDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNAENSRERGH* 446
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01107 445 PANTHER CASEIN KINASE II SUBUNIT ALPHA 110 440 IPR045216 GO:0004674|GO:0006468
Pte14g01107 445 CDD STKc_CK2_alpha 127 431 IPR045216 GO:0004674|GO:0006468
Pte14g01107 445 SMART serkin_6 146 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte14g01107 445 FunFam Casein kinase II subunit alpha 132 222 - -
Pte14g01107 445 Pfam Protein kinase domain 146 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte14g01107 445 SUPERFAMILY Protein kinase-like (PK-like) 119 435 IPR011009 -
Pte14g01107 445 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Pte14g01107 445 Gene3D Transferase(Phosphotransferase) domain 1 223 431 - -
Pte14g01107 445 Gene3D Phosphorylase Kinase; domain 1 146 222 - -
Pte14g01107 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Pte14g01107 445 FunFam Casein kinase II subunit alpha 223 434 - -
Pte14g01107 445 ProSiteProfiles Protein kinase domain profile. 146 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte14g01107 Pte-Chr14 32628441 32633266 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01107 144 434 Core Cell Cycle Gene Families AT1G76540 29.747 1.12e-41 148
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Pte14g01107 Pkinase 4.8e-66 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01107 K03097 - qsa:O6P43_024562 681.789
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01107 14 32628441 32633266 Pte14g01107 14 32628441 32633266 RCT