Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01071 ATGGGGAGAGCTCCTTGCTGTGACAAAGCCAACGTCAAGAAAGGTCCCTGGTCACCTGAAGAAGATGCCAAACTCAAGGCTTACATCGACGAGAACGGAACAGGCGGAAACTGGATTGCCTTGCCTCAAAAAATAGGCCTGAAGAGATGTGGGAAGAGCTGCCGCCTGAGATGGTTGAATTATCTCAGGCCAAACATTAGACATGGGGACTTTTCTGAGGAAGAAGATAACATTATTTGCAGTCTCTATGTTAGCATCGGAAGCAGGTGGTCTATTATAGCTGCTCAATTACCTGGACGCACGGATAATGACATAAAGAACTATTGGAACACAAGGTTGAAGAAGAAGGTCCTGGGTAAGCAGCGGAAAGAGCAGCAGGCACAAGCTCGCCGTGTAGTCAGCCTAAAGCAAGAGATGAAGAGAGAACTCCAGAACTTGAACATGGCAACTGAGGGGTTGATGAACCCAGACCCCTATTGGACTGTAGGGTACAATCCCACACCAGCTCTGCCATTGACGAATGTCCCAATTCAAGATTACTCGTACGACCAGACATCCCTAAGGAACTTACTAATCCACCTCGGTGGTAGATTTTCAGTAGATGATGATCATCAACAATCATCCAACAGTCCTACTGTTGCCACTAGCACCAATTGGCAATACAATCCTTGCGATGTTAATTCTTTCCCACCACAACAATTATACGAAACCCCCATGAACGTTGTAAACTCTTTGACAGAGTTAACAATAAACGATGGCAACTCCGGCCTCTCCGAAAACGCTTTTCAAGTGATGAATGATAACTTCCCTACTGAATTGAGTCATTTGACCAGTACTGAGCTAATACAAAGGGACGATGCGTTGATGGAGCAATACTTCGCCATGGAGGCCATGGACATGGTCAGTGGTAGCAGCACCGTGACAAGCTCCACGGGGAGTGGCAGCTGGGGAGACATGAGCTCTCTGGTTTATTCATCACAGTCGGAATCATACTATGAAGCTTGCCAGCAAGGAATCCCGCAAGATTATGCTTTCGAGGAGTCAAGATACTAA 1053 0.4663 MGRAPCCDKANVKKGPWSPEEDAKLKAYIDENGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIRHGDFSEEEDNIICSLYVSIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKVLGKQRKEQQAQARRVVSLKQEMKRELQNLNMATEGLMNPDPYWTVGYNPTPALPLTNVPIQDYSYDQTSLRNLLIHLGGRFSVDDDHQQSSNSPTVATSTNWQYNPCDVNSFPPQQLYETPMNVVNSLTELTINDGNSGLSENAFQVMNDNFPTELSHLTSTELIQRDDALMEQYFAMEAMDMVSGSSTVTSSTGSGSWGDMSSLVYSSQSESYYEACQQGIPQDYAFEESRY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01071 350 CDD SANT 71 113 IPR001005 -
Pte14g01071 350 FunFam Transcription factor RAX3 7 68 - -
Pte14g01071 350 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pte14g01071 350 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pte14g01071 350 Gene3D - 70 144 - -
Pte14g01071 350 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pte14g01071 350 SMART sant 67 115 IPR001005 -
Pte14g01071 350 SMART sant 13 64 IPR001005 -
Pte14g01071 350 Gene3D - 7 68 - -
Pte14g01071 350 CDD SANT 16 62 IPR001005 -
Pte14g01071 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pte14g01071 350 FunFam Transcription factor RAX3 70 145 - -
Pte14g01071 350 Coils Coil 122 149 - -
Pte14g01071 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pte14g01071 350 PANTHER OS09G0431300 PROTEIN 1 305 - -
Pte14g01071 350 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pte14g01071 350 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01071 Pte-Chr14 32344710 32346534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01071 1 331 MYB Transcription Factor Family AT3G49690 49.408 7.45e-90 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte14g01071 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01071 K09422 - qsa:O6P43_033945 350.132