Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01062 ATGGCTGAGAGGAAACGCAGAGAAAAACTTAGTCAAAGGTTCATAGCTCTTTCGACCATCCTCCCAAGTTTGAAGAAGATGGATAAGGCCTCAGTTCTCGAAGATGCTATCAATTACGTGAGGAAGCTTGAAGAACAGGTGAAAACCCTGGAAAAAGAAATTGCTGCACAAACTGTGGAATGTGCAGTCCTTCTAAAAAATCTCATGTCTATGCAGATTCTTCATCGTGCGTTGAAAACTCACACCTGCAGCTTCATGACCAGTCTCTCCCTGTTGTTGAAGCTAGGGTTTCTGATAAGGATGTGCTTGTAA 312 0.4295 MAERKRREKLSQRFIALSTILPSLKKMDKASVLEDAINYVRKLEEQVKTLEKEIAAQTVECAVLLKNLMSMQILHRALKTHTCSFMTSLSLLLKLGFLIRMCL* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01062 103 Gene3D - 1 68 IPR036638 GO:0046983
Pte14g01062 103 SMART finulus 1 49 IPR011598 GO:0046983
Pte14g01062 103 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 71 IPR036638 GO:0046983
Pte14g01062 103 PANTHER BHLH TRANSCRIPTION FACTOR 1 67 - -
Pte14g01062 103 Coils Coil 33 60 - -
Pte14g01062 103 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 43 IPR011598 GO:0046983
Pte14g01062 103 Pfam Helix-loop-helix DNA-binding domain 2 44 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01062 Pte-Chr14 32290008 32290466 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01062 1 66 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 59.091 1.69e-18 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte14g01062 HLH 3.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01062 - - zof:122029909 95.1301