Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01061 ATGGATGCTTCCCTGGAGAGCTTGTTGACAGAATTGCTACCTGTAAATGAAAGTGAAGAAGACTACGTTCATGCTGGAACTGAGATGTTCAGCTCACAAGGCATAGCCCTGGAATCAATGGAAGATGACACCAATGATATCCATTTATCCAGTGGAAATGAAATGGAGGACTACCTTAACGACGAGATGTTTCGCTATACTGACATGGACAACCAAGAATACCTTTCTACGGAGAATCGTCTATCCCATTATGTTAATCAAAGCGACAATGCATCATCTGCAAGAGACGCGACAATCTTGGAGAAGGAGAGGCCTGTCAAGAAAATCAACGCTGGTAGCTGCAAGTCTGCTGGGTCAAAATCCTTGTCTTACGTTCTTTCTTTTGAGAAACCATGCATACCACTCGTTACGAACCAAATACTCGTGAGTGAAGGACAACATGTGGGAGCTGGGTTTGGAGTAAACAAGAAGGTTGCGTTTCCTTCAGGGGACAAGAATACCTCGTCGCCTTCCTCGAAAAATCAAAAGTTAGAACCAACTTGTGGAATGCAAGGGCCCAGGACTCCTAACTCATTAGCTAGAGGAACCAAACGTGGTAAGGACCACATAATAGCTGAGAGATTGAGGCGAGAAAAGCTAGCCGAGCTGTTCATTTCACTGTCAGCCCTCATCCCAGAACTCAAGAAGATTGACAAAGCTTCTGTGCTGTCGGACGCTATAAAGTATTTGAAGCAGCTTAAAGAGCGTGTAAAATTGCTTGAGGAGCAGAACAAGACAAGTGTTAACCCAACTATGTGCATTAAGAAAACTGAGTTTGCAACTGCTGCTAATGAAGATGACTCTGACGCATCCTGCAGTTCAAGTGTTGAAAACCCTAACATGGGCATCTCTAGTGATCCCATGCCCGAAGTCGTTGTGAGAGTCTCAGATAACAATGCGCTCATCAGAATACACTGTGGAAAACATAAAGGAGTTCTTGCCAATATATATAATGAAATAGACAATCTTCATCTATCAGTTATCCACACTACTGTCTTGCCTTTTGGAGACTCTCGCCTAGAAGTGACCATTGTCGCTGAGATGTTTGATGCATACAAGATGACAGCGATGGACATAGCAAGAATCCTTAAGGCCAGTTTGCCGAAGAAAGTTGTAAAAATGGTGTGTGAAAGTTGA 1176 0.4345 MDASLESLLTELLPVNESEEDYVHAGTEMFSSQGIALESMEDDTNDIHLSSGNEMEDYLNDEMFRYTDMDNQEYLSTENRLSHYVNQSDNASSARDATILEKERPVKKINAGSCKSAGSKSLSYVLSFEKPCIPLVTNQILVSEGQHVGAGFGVNKKVAFPSGDKNTSSPSSKNQKLEPTCGMQGPRTPNSLARGTKRGKDHIIAERLRREKLAELFISLSALIPELKKIDKASVLSDAIKYLKQLKERVKLLEEQNKTSVNPTMCIKKTEFATAANEDDSDASCSSSVENPNMGISSDPMPEVVVRVSDNNALIRIHCGKHKGVLANIYNEIDNLHLSVIHTTVLPFGDSRLEVTIVAEMFDAYKMTAMDIARILKASLPKKVVKMVCES* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01061 391 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 260 IPR036638 GO:0046983
Pte14g01061 391 Gene3D - 191 261 IPR036638 GO:0046983
Pte14g01061 391 SMART finulus 203 252 IPR011598 GO:0046983
Pte14g01061 391 MobiDBLite consensus disorder prediction 160 197 - -
Pte14g01061 391 Coils Coil 236 256 - -
Pte14g01061 391 PANTHER BHLH TRANSCRIPTION FACTOR 62 380 - -
Pte14g01061 391 MobiDBLite consensus disorder prediction 161 191 - -
Pte14g01061 391 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 197 246 IPR011598 GO:0046983
Pte14g01061 391 Pfam Helix-loop-helix DNA-binding domain 201 247 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01061 Pte-Chr14 32279070 32282535 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01061 184 380 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.444 7.31e-44 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte14g01061 HLH 2.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01061 - - qsa:O6P43_024488 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01061 14 32279070 32282535 Pte14g01061 14 32279070 32282535 RCT