Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01060 ATGGAATCTCCATCTCCAGTTGCATGGCTCAATGCTGAATTGGAGGAATTCGATAATTTGGACTTCATTCTAGACTGTCCCATGCTTGGAGATATTGCTGCACAAGAAATCGACGTTTCGGTTCTTGGCGAAGAACTTCATCACTCATTGTCATCTGAGAACGAGAGCTCTACCTCTTTTCCTGCAACGAACAATGACGAAAATGCTTACATATCCATCTCTCCAATGGTTACAGATTCACTTCATGAGGATTTTACAGGTGCAGAGAGGCCTGCAAACCAGGTCAAAGCGAATGGGGGTAGCCATACTAATTGGAACTCTAGCTTAACAAAGCATTTCTCTATGTCATCATTTAAGTCCCAAGTTCTGCTATCTTTTGAGAATCCAAATTCTTCACCTACTGGTTCAACCAACACAAACCATTTCCATGAACGCGTGGGCAATGGTAATCAGGTTGTGAAGCCAAAACAGACAAGGCCAATGCATTTTTCATCGGCTTCACCACCAAAGGACACCTTAGATGCAGAACATTATGCTTCAAAGACCAACAAATTAGCAGGAACCAAGAGGAGTCATTCTGCCAAAAGATCTCCTCCTCACGCCAGAGACCACATCATGGCCGAGAGGTTGAGAAGGGAAAAGCTCACACAGCGTTTCATCGCTCTCTCAGCCCTTATCCCTGGCCTCAAGAAGGTGGACAAGGCTTCTGTGCTTGAGGATGCAATAAAGTACGTGAAGCAGTTGCAAGAACGAGTGAATGTGCTGGAAGAACAAACCAAGAAGAGAACGGTTGAATCTGTGGTGCTGGTGATGAAAAATAACCCCTCAGTTTCAAGCGTTGAGGATGACAACCCATCATCGTGCGACGAAACCTCTCCGACTGATCGGAGCCATGGATGCTTTACCGATGATTCTTTCCCTAAAGTGGAAACAAAAATCGCTGAAAAGCAATTGCTTGTCCGAGTTCACTGTCAACGACGGATGGGAGTATTGACTCAAATCCTTGACGCTCTTGAAAGCTTCCACCTTTCAATACTCAGCAGTAGCGTCTTGCCATTTGGAGATCTCACTCTTGATATCACCATTATTGCCAAGATGGAAGTGGAATACAAAATGACCATTAAGGAGCTTGTCAAACACCTGAGGCTGGCAATGTCAAATTTCAATAGCGTATGA 1176 0.4456 MESPSPVAWLNAELEEFDNLDFILDCPMLGDIAAQEIDVSVLGEELHHSLSSENESSTSFPATNNDENAYISISPMVTDSLHEDFTGAERPANQVKANGGSHTNWNSSLTKHFSMSSFKSQVLLSFENPNSSPTGSTNTNHFHERVGNGNQVVKPKQTRPMHFSSASPPKDTLDAEHYASKTNKLAGTKRSHSAKRSPPHARDHIMAERLRREKLTQRFIALSALIPGLKKVDKASVLEDAIKYVKQLQERVNVLEEQTKKRTVESVVLVMKNNPSVSSVEDDNPSSCDETSPTDRSHGCFTDDSFPKVETKIAEKQLLVRVHCQRRMGVLTQILDALESFHLSILSSSVLPFGDLTLDITIIAKMEVEYKMTIKELVKHLRLAMSNFNSV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01060 391 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 199 248 IPR011598 GO:0046983
Pte14g01060 391 SMART finulus 205 254 IPR011598 GO:0046983
Pte14g01060 391 Gene3D - 200 268 IPR036638 GO:0046983
Pte14g01060 391 CDD bHLH_AtNAI1_like 200 272 - -
Pte14g01060 391 MobiDBLite consensus disorder prediction 275 296 - -
Pte14g01060 391 Pfam Helix-loop-helix DNA-binding domain 204 249 IPR011598 GO:0046983
Pte14g01060 391 Coils Coil 238 265 - -
Pte14g01060 391 MobiDBLite consensus disorder prediction 152 202 - -
Pte14g01060 391 CDD ACT 320 382 - -
Pte14g01060 391 PANTHER BHLH TRANSCRIPTION FACTOR 50 386 - -
Pte14g01060 391 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 266 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01060 Pte-Chr14 32270590 32277172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01060 160 388 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.121 3.79e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte14g01060 HLH 6.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01060 - - fve:101302784 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01060 14 32270590 32277172 Pte14g01060 14 32270590 32277172 RCT