Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01055 ATGATAGCTTTGCTAGCAGAAGCACCATATATGGCAGCTGAGCTTAGTTTTCTCTCCATGACCCAGATCCAAAAATTGTCTCAATACCAAAATAGAAACCAAACCCAACATCCAGTAAACCCTGATTCCATGACTTCATCACATTCAAATCACATGTGGAACTCTAGGGAAATCCATCAAGAAGATGATGACTCATGGGAGGTTAGAGCTTTTGCTGAAGATACCAATGTCATGGGGAGCACTTGGCCTCCTAGGTTTTACAGATGCACATTTTGTAGGAGAGACTTCCGATCAGCCCAAGCCCTAGGAGGACACATGAATGTGCACCGCCGTGACCGAGCACGAATCCACCAAGTACAACCATCTTCTTCCATAATTTCCAGTTGGCCTCTAAATTCTTCACATGTGATCCCAACTCGAGAATTTTTTCCAAATGATGGATTATGCTCCTTCTACCAGATACCAAAACCAAGTAACGCTATCACTCCCACAGCTCCGAAAGCGATGATTGACTCATCCTCTAAATTCCACAACATCCCAGCTCAACCAAAAAACAACTTGCTTTCACCTTTATCCATGAATTTTCCTGTGGCAAAAACAACAGCGTCTAATTCTTCATATCGTTACTGTGGCAAAACTCAAGAACCCTCGGCTTCCTCAGAGAAATGCCATGAAGACCTTGATTTAGAGCTCAGGCTTGGGCAGAGAAGAAGACCAGCCTGA 723 0.4385 MIALLAEAPYMAAELSFLSMTQIQKLSQYQNRNQTQHPVNPDSMTSSHSNHMWNSREIHQEDDDSWEVRAFAEDTNVMGSTWPPRFYRCTFCRRDFRSAQALGGHMNVHRRDRARIHQVQPSSSIISSWPLNSSHVIPTREFFPNDGLCSFYQIPKPSNAITPTAPKAMIDSSSKFHNIPAQPKNNLLSPLSMNFPVAKTTASNSSYRYCGKTQEPSASSEKCHEDLDLELRLGQRRRPA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01055 240 Pfam C2H2-type zinc finger 87 111 - -
Pte14g01055 240 Gene3D Classic Zinc Finger 78 133 - -
Pte14g01055 240 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Pte14g01055 240 SUPERFAMILY beta-beta-alpha zinc fingers 84 114 IPR036236 -
Pte14g01055 240 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Pte14g01055 240 PANTHER OS07G0101800 PROTEIN 60 236 - -
Pte14g01055 240 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01055 Pte-Chr14 32203794 32204516 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01055 52 159 C2H2 Transcription Factor Family AT4G17810 48.000 1.21e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte14g01055 zf-C2H2_6 1.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01055 - - jre:108984087 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01055 14 32203794 32204516 Pte14g01055 14 32203794 32204516 RCT