Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01051 ATGGATTCACGGGAACAACCTCCGCAGCCACAAGGTCCACAAGGACTACATCAACACCACCAACAGCAGCAGCAGCAGCAGCATCATCATCACCATCATCATACTGTTCCTCCTCCGCCGAACATGATGGTGGGACCCGCATCATACCCGAGTAATATGTCTATGTCCATGACCAACGCAAATGTGAACTCGAACGCTAACCCTTCTTCATTGATCACGCCCAATTCTTCGGCTACCATGATGTCACCCGCCACCGCTCGATTTCCTTTCAACTCTGTCGTCCCACAACCACAGCTGCCTGCTAAACCTTCGGATTCAGTCGACCATGGCAGTCCGTACGAAGGATCCTCGCCTGCGCTGAGGCCTTGTGCTCCTGCCACTGGTTTCAACATGGATTGCGCCAAGAAGAAAAGAGGGAGGCCAAGGAAATACTCGCCTGATGGCAACATTGCTTTGGGCTTGGCGCCAACGGCTATGGTCTCCTCTGCTGGGCAGGGAGATTCCACTGGAACGCCCTCCACCAACCCTGCTCCCAAGAAACACCGAGGAAGGCCTGCTGGTTCAGGAAAGAAGCAATTGGATGCTCTGGGAGCTGGAGGAGTTGGGTTTACTCCTCATGTGATCATGGTGAAAGTAGGGGAGGATGTTGCTTCCAAGATAATGGCCTTTTCGCAACAAGGGCCTCGCACAGTTTGTATTCTCTCTGCCAACGGTGCTGTTAGTAATGTTACCCTTCGGCAGCCAGCAACAGGCGGCGGTACAGTTACATATGAGGGTCGATTTGAAATTGTTTCTCTATCAGGTTCTTTTGTAATCTCTGATGATAGTGGCGGTAGTAGAACTGGCGGTTTGAATGTGTCTCTAGCAGGGTCCGATGGACGTATGTTGGGTGGTGGAGTTGCAGGGATGCTGACAGCAGTGTCTAATGTGCAGGTCATTGTAGGGAGCTTCATCGCTGATGGGAAAAAATCAAAGTCAAATCCAGGAATATCTAGTCCTTCTTCAGCACCGGCTTCATCCCAGATGTTGAACTTTGGTGCACCTATGACACCAGCCACTCCTCCCTCACAAGGCCCCTCTAGCGAGTCATCTGATGACAATGGTGATGTCCCTTTTAACAGAGGGCCGGACCTCTACAATAATGCAAGTCAACCACTACACAACATGCCGATGTACCATCACATATGGGCTGGCCAATCTCAACAGTGA 1209 0.5128 MDSREQPPQPQGPQGLHQHHQQQQQQQHHHHHHHTVPPPPNMMVGPASYPSNMSMSMTNANVNSNANPSSLITPNSSATMMSPATARFPFNSVVPQPQLPAKPSDSVDHGSPYEGSSPALRPCAPATGFNMDCAKKKRGRPRKYSPDGNIALGLAPTAMVSSAGQGDSTGTPSTNPAPKKHRGRPAGSGKKQLDALGAGGVGFTPHVIMVKVGEDVASKIMAFSQQGPRTVCILSANGAVSNVTLRQPATGGGTVTYEGRFEIVSLSGSFVISDDSGGSRTGGLNVSLAGSDGRMLGGGVAGMLTAVSNVQVIVGSFIADGKKSKSNPGISSPSSAPASSQMLNFGAPMTPATPPSQGPSSESSDDNGDVPFNRGPDLYNNASQPLHNMPMYHHIWAGQSQQ* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01051 402 MobiDBLite consensus disorder prediction 91 192 - -
Pte14g01051 402 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 372 IPR039605 GO:0003680
Pte14g01051 402 MobiDBLite consensus disorder prediction 1 22 - -
Pte14g01051 402 MobiDBLite consensus disorder prediction 322 384 - -
Pte14g01051 402 SUPERFAMILY AF0104/ALDC/Ptd012-like 203 319 - -
Pte14g01051 402 SMART AT_hook_2 135 147 IPR017956 GO:0003677
Pte14g01051 402 SMART AT_hook_2 179 191 IPR017956 GO:0003677
Pte14g01051 402 MobiDBLite consensus disorder prediction 1 78 - -
Pte14g01051 402 ProSiteProfiles PPC domain profile profile. 199 338 IPR005175 -
Pte14g01051 402 CDD DUF296 204 317 IPR005175 -
Pte14g01051 402 MobiDBLite consensus disorder prediction 47 78 - -
Pte14g01051 402 Pfam Plants and Prokaryotes Conserved (PCC) domain 205 317 IPR005175 -
Pte14g01051 402 MobiDBLite consensus disorder prediction 325 368 - -
Pte14g01051 402 Gene3D - 205 329 - -
Pte14g01051 402 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01051 Pte-Chr14 32128323 32131942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01051 128 403 AT-hook Motif Nuclear Localized (AHL) Family AT4G17950 50.470 3.54e-77 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01051 - - qsa:O6P43_033975 506.523