Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01045 ATGGGTTGCACCGTGAGAGATAAGCATATCCGACCCAATCGGAGAACTCGATCAGCGAAGACCGATACAGGTTCGTGCTGTCATCAAGAGAGAGCTACGGTTTCTGAATCCCTCGAACCGGATCTCAATACGTTGAAAATGTATCCGGGTCTCAATTCGGGCCAAATTCCGATTCCCGTTTCAGTTCCCAACCCTAACCCTAATTCCAATCCTAATACTGAAGAAAACGGAGGTTGGGGTTACTGCACCGAGGAGCAATTAGAAGAAATCTTATTGAGGAACTTGGAATTTTTGTACAATGAAGCTGTGGCGAAGCTTGTTGCTTCGGGTTATGATGAAGAAGTTGCGATAAAAGCTATTTTGCGAAGTGGACATTGCTATGGAAGTATGGATGTGTTGCAGAACATAGTGCGTAACTCATTGGAATGTCTACAGAGCGACAATTGTGATTTGAATGTGGACGAGTCTGAGGTTGTCTTTTCCGATTTTAGACAGTTGGAGGAGTACTCGCTTGCAGGTATGATATGTATGTTGCAACAAGTGAGACCTCATTTGAGTAAAGGCGACGCTATGTGGTGTTTGCTTATGAGTGATCTTCATGTGGGTCGGGCTAGCTCCATGGAAATTCCCGTGGTTCCATCGCCTGCAAATGTCAATGGGTGTAGTGGTCCTGCATGTAATAGTGTTGACACGTGTACCCATGGGGCTGGTGTGATGCCACCTGCACTTTGCAGGTTTCATGGTGGCTGGGGATTTGGAAATGGTGGAGCCTCTGAATTGCCGATTGATGGTTTTATCTCTTATGGTACAGAGCTCGCGTTGCAGAGAGATATTGAGTGTCCCAAAAGGTTCAATCTTTCTCCTACCATGAAATCTCTATTAAGAAAGAATGTGGCCGCGTTTGCAGCTGGTTTTCGAGCTAACTCTAAACAGATGCAGACACAAGCTAAACCCACTTCTGGTGCTCTGCCTAATCCCGCTGCACCTGTTGCATCAGGTGCTGAAGTACCTGCTGAGCAATCAGGGTCTCAAAACTTAAAGAACCAAGATATTATTAACTCGCTCATGGATAAATTTCGTGATCTGAACCTGGAAGGAAATTTGGAGTTTGAAACAGAAGATCAGAAGGATGAAGTTATACTCACCTTGCTTCATCAGGTCAAGCGTCTCGAGAAGCAAGTGAAGGAGAGGAAGGAATGGGCCCAGCAAAAAGCAATGCAAGCTGCGGGAAAGCTCAGTAATGATCTTACTGAGCTTAAAAATCTGAGGATGGAAAGAGAAGAGAATCAAAGATTCAAAAAAGGGAAGCAGAATCTGGAGGATTCGCCAATGAAGAGATTGTCGGATATGGAAAATGCTTTGAGAAAGGCTAGTGGTCAGGTGGACAGGGCCAATGCAGCTGTGAGACGACTTGAAGTGGAGAATGCAGAGATCAGAGCAGAGATGGAAGCTTCTAAATTAAGTGCATCGGAATCGGCTAAAACTTGTATGAAGGTTGAGAAAAGGGAGAGGAAGTGCAAGAGGAAGCTTGCGGCCTGGGACAAACAGAAGGCCAAGTTGGAGGAGGAGATTTCTGCAGGAAAAGAGAAGGTCTTGGAGTTGCAGCGAAATTTGGCTCAGATTAAGCAGACTCAGAAAGAAACAGAGTTGAAGTGGATGGAGGAGATTAGGACTAAAGAGGAAGCATCAGCACTGGTGGATGAGGAGCGGCACTCTAAAGAAGCCGCTGAGTCAAACAACAAAAGGAAGCTCGAGGCCTTGCGCCTGAAGATAGAAATAGATTTCCAACGTCACAAGGATGATTTACAGAGACTTGAGCAGGAACTTTCTCGGTTGAAACCATCTGACCGAATAAGTCCTTCACCTGCACGAGAGTCTTCGGAGAAATCTAATCCTGAAGGGGAGACAATTGCTGCGCTGCTTGAAGAAATGGACAAGCTAGATGCTTTTTCAGAAGATGAGTTGGGCTTTGAGAGGAAGTGTATAATATGCCTGAAAGATGAAGTCTCTGTTGTTTTCCTGCCTTGTGCACACCAAGTTATGTGTGGCAGCTGCGGCGATGACTATGGTAAAAAGGGTAAAGCTACTTGCCCATGCTGCCGGGTCACTATTGAACAAAGGATCCATGTTTTTGGAGCAAGTTCCTAG 2148 0.4558 MGCTVRDKHIRPNRRTRSAKTDTGSCCHQERATVSESLEPDLNTLKMYPGLNSGQIPIPVSVPNPNPNSNPNTEENGGWGYCTEEQLEEILLRNLEFLYNEAVAKLVASGYDEEVAIKAILRSGHCYGSMDVLQNIVRNSLECLQSDNCDLNVDESEVVFSDFRQLEEYSLAGMICMLQQVRPHLSKGDAMWCLLMSDLHVGRASSMEIPVVPSPANVNGCSGPACNSVDTCTHGAGVMPPALCRFHGGWGFGNGGASELPIDGFISYGTELALQRDIECPKRFNLSPTMKSLLRKNVAAFAAGFRANSKQMQTQAKPTSGALPNPAAPVASGAEVPAEQSGSQNLKNQDIINSLMDKFRDLNLEGNLEFETEDQKDEVILTLLHQVKRLEKQVKERKEWAQQKAMQAAGKLSNDLTELKNLRMEREENQRFKKGKQNLEDSPMKRLSDMENALRKASGQVDRANAAVRRLEVENAEIRAEMEASKLSASESAKTCMKVEKRERKCKRKLAAWDKQKAKLEEEISAGKEKVLELQRNLAQIKQTQKETELKWMEEIRTKEEASALVDEERHSKEAAESNNKRKLEALRLKIEIDFQRHKDDLQRLEQELSRLKPSDRISPSPARESSEKSNPEGETIAALLEEMDKLDAFSEDELGFERKCIICLKDEVSVVFLPCAHQVMCGSCGDDYGKKGKATCPCCRVTIEQRIHVFGASS* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01045 715 CDD RING-HC_MIP1-like 658 710 - -
Pte14g01045 715 Coils Coil 588 608 - -
Pte14g01045 715 Pfam Zinc finger, C3HC4 type (RING finger) 658 706 - -
Pte14g01045 715 MobiDBLite consensus disorder prediction 310 347 - -
Pte14g01045 715 Coils Coil 422 442 - -
Pte14g01045 715 Coils Coil 503 551 - -
Pte14g01045 715 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 648 712 IPR013083 -
Pte14g01045 715 SUPERFAMILY RING/U-box 660 707 - -
Pte14g01045 715 MobiDBLite consensus disorder prediction 607 634 - -
Pte14g01045 715 Coils Coil 447 488 - -
Pte14g01045 715 Pfam Family of unknown function (DUF6592) 94 207 IPR046527 -
Pte14g01045 715 PANTHER OS05G0141500 PROTEIN 1 710 IPR046934 -
Pte14g01045 715 MobiDBLite consensus disorder prediction 56 77 - -
Pte14g01045 715 ProSiteProfiles Zinc finger RING-type profile. 661 701 IPR001841 -
Pte14g01045 715 MobiDBLite consensus disorder prediction 1 25 - -
Pte14g01045 715 Coils Coil 559 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01045 Pte-Chr14 32078321 32082699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01045 614 711 C3H Transcription Factor Family AT1G73950 35.577 3.20e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01045 - - qsa:O6P43_024474 927.546