Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01030 ATGCTGGTCTTCCTGTCTTGTGTTGTGCATGGTGGGTTGAGAAACGATGCCAAACGAGCTATGGTTTGCACAGCTGACGATTTACAGGAATGGAAAGATTTTCCCAAGGGACTCCGGGTTCTACTTCTTGATGAAGAAGGTAGTTCAGCCGCTGAGATAAAGCCAAAGCTTGAGGCAATGGACTACATTGTTTCTACATTCTACAACGAGACTGAAGCCTTGTCAGCAATTACAAGCAGACCTGAAAGCTTCCATGTGGCTATAGTGGAGGTAAGTCAAAGTAATAGTGAGGGCCATTTACAATTTCTCGAGAATGCCAAAGATTTGGCTACGATTATCACTTCAGATGTCCATTGCCTAAATATGATGATGAAGTGCATAGCGCTCGGTGCTGTTGAATTTATGCTGAAACCGCTTTCTGAGGATAAACTCAGGAATATCTGGCAGCACGTAGTTCACAAGGCATTTAATTCAGGGATGAGTGGCAATTCAAAAACACTTAAACCTGTCAAAGAGTCGCTAGTGTCCATGCTGCAAATCCGAAAAGAAGATGAAGTACACGACGCAGTATATTGTCAAAATACATCTGGAGTTGATGAAATGGACTCCGATCTGACAAGTGGCAATGACAGATACCCTGCTCCTTCAACCCCACAAATAGAACATGGTGCGCGGTCACATGATGACGGTGATTGCCACGATCAGAATAACTGCTCAACAGAGAAAGAGAGTGGAGAGCAAGATGGGAAATCTAAATCCGTCGACACAACATGTAATGGTGGAAGCATAGAAGCTTCCTTGACAGAGAATTTGCCTATCAGTCTGCCGGAAACTACGATCAAGGAGGAAGGGGACTTGGCTGATGCTAGGAGAGAGAATGAAACATCTCTTCACTCACAGAATGAAAAAGATCTCAGCAACATTACCATTTGTCATACATCTCCAAGTAAAGCCTCCATTCTCCGTGATTCAAAAGGGATCAAAGCTTATCGGAAGAAAATAAAGGTAGACTGGACACCTGAGCTACACAAGAAGTTTGTGCAGGCAGTAGAACAGTTAGGCATTGATCAAGCCATTCCTTCTCGCATACTGGAGCTAATGAAGGTGGAAGGTTTGACAAGGCATAATGTTGCGAGCCATCTACAGAAATATAGAATGCATAAGAGACATATCTTGCCAAAGGAAGACGAGCGCAGATGGTTGCACCAGAGAGATCAAAAGCAAAAGTTCTATTATCAACAGAGACCAATAATGGCTTTTCCCCAATACTATCCTAACCGGACACTACCTACTGTACCTGTATATCCAATGTGGGGACATTCTGCTAGTTACCCACCCAGTGTCCAGATGTGGGGTTCGCCTGGCTATCCCATGTGGCAACCACAAGAAAGTGGGTTTTGGAAGCCTTCTCCAGAGATGCATGCAGATGCATGGGGTTGCCCGGTAGTGCCTCCTTCTCATGGTGCTTCAATCCATCCTCATAATCCACTTGGATTTCATAATACGAATGGTGTTGATTACTGCAGAAGCATGCCACAAAATTCATTTCTGCTTGGTCAGGCAGAGGAGGTTATTGACAAAGCTGTGAAGGAGGCAATAACCAAGCCATGGCTACCTTTACCCTTGGGCCTCAAACCTCCTTCCACCGATAGCGTGTTAGCTGAGCTCTCAAGGCAAGGCATCTCCAATATCCCTTCTTGTAGCAAAGTTAAACTTTTTTAA 1722 0.4448 MLVFLSCVVHGGLRNDAKRAMVCTADDLQEWKDFPKGLRVLLLDEEGSSAAEIKPKLEAMDYIVSTFYNETEALSAITSRPESFHVAIVEVSQSNSEGHLQFLENAKDLATIITSDVHCLNMMMKCIALGAVEFMLKPLSEDKLRNIWQHVVHKAFNSGMSGNSKTLKPVKESLVSMLQIRKEDEVHDAVYCQNTSGVDEMDSDLTSGNDRYPAPSTPQIEHGARSHDDGDCHDQNNCSTEKESGEQDGKSKSVDTTCNGGSIEASLTENLPISLPETTIKEEGDLADARRENETSLHSQNEKDLSNITICHTSPSKASILRDSKGIKAYRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILELMKVEGLTRHNVASHLQKYRMHKRHILPKEDERRWLHQRDQKQKFYYQQRPIMAFPQYYPNRTLPTVPVYPMWGHSASYPPSVQMWGSPGYPMWQPQESGFWKPSPEMHADAWGCPVVPPSHGASIHPHNPLGFHNTNGVDYCRSMPQNSFLLGQAEEVIDKAVKEAITKPWLPLPLGLKPPSTDSVLAELSRQGISNIPSCSKVKLF* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01030 573 MobiDBLite consensus disorder prediction 251 275 - -
Pte14g01030 573 MobiDBLite consensus disorder prediction 281 299 - -
Pte14g01030 573 Gene3D - 329 391 - -
Pte14g01030 573 FunFam Two-component response regulator-like APRR2 37 163 - -
Pte14g01030 573 FunFam Two-component response regulator 329 392 - -
Pte14g01030 573 MobiDBLite consensus disorder prediction 197 301 - -
Pte14g01030 573 PANTHER TRANSCRIPTION ACTIVATOR GLK1 21 566 IPR044825 GO:0003700|GO:0045893
Pte14g01030 573 Gene3D - 38 162 - -
Pte14g01030 573 SUPERFAMILY Homeodomain-like 332 390 IPR009057 -
Pte14g01030 573 Pfam Myb-like DNA-binding domain 336 385 IPR001005 -
Pte14g01030 573 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 332 389 IPR017930 -
Pte14g01030 573 NCBIfam myb-like DNA-binding domain, SHAQKYF class 333 388 IPR006447 GO:0003677
Pte14g01030 573 MobiDBLite consensus disorder prediction 197 214 - -
Pte14g01030 573 ProSiteProfiles Response regulatory domain profile. 39 152 IPR001789 GO:0000160
Pte14g01030 573 SUPERFAMILY CheY-like 36 154 IPR011006 -
Pte14g01030 573 MobiDBLite consensus disorder prediction 222 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01030 Pte-Chr14 31941187 31947084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01030 21 568 Response Regulator Gene Family AT4G18020 48.354 1.15e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pte14g01030 Myb_DNA-binding 1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01030 - - qsa:O6P43_024457 714.916