Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01024 ATGGCAGACAATTCAACATGTGATAATTGCTTTGTCCATTCTCGAGCAGCTTACTATCCACATTCTGATCAAAATGGAACAGATGTTGGAGCATGTGGATTTGGCTCTTTTGGTGCCATTGTTAATGGAGGGGACGTTTCTACTGCATCGGCACTGTACAGAAACGGGGTTGGCTGTGGTGCCTGTTACCAGGTGAGATGCACCGACAGTGCCTATTGTTCAAATAATGGAGTGACTGTTGTGATCACCGACCAAGGATCAGGTGATCGCACAGATTTTATCCTCAGCAGGCATGCCTATAGTAAAATGGCGCAAACTGTTGATGAAGCTGCTTCTATACTAGCCCTTGGTGTGGTTGATATTGAATACAGAAGGGTTTCATGCAGCTATCCGAACAAAAACATAACTTTCAAGATAGATGAGAGCAGCGTCAATCCTTATTATTTGGCGTTTGTTATATGGTTTCAACAAGGAAATCAGGATATCACAGCTGTGCAGCTTTGTGAGACTCAAAATTTTGTGTGCAAGCTATTGGATCGGAGTCATGGAGCTGTATGGACTTCAACATCTCCCCCAAGTGGACCTCTGCAAATAAGGATGCTCTTCAGCGATGATGATGGAGATGACAACTGGGTTGTCCCTGTTAACAATATTCCCCAGGACTGGAAGCCTGGGGCAACATATGACTCTGGAGTACAAGTCAATATTTAA 711 0.4402 MADNSTCDNCFVHSRAAYYPHSDQNGTDVGACGFGSFGAIVNGGDVSTASALYRNGVGCGACYQVRCTDSAYCSNNGVTVVITDQGSGDRTDFILSRHAYSKMAQTVDEAASILALGVVDIEYRRVSCSYPNKNITFKIDESSVNPYYLAFVIWFQQGNQDITAVQLCETQNFVCKLLDRSHGAVWTSTSPPSGPLQIRMLFSDDDGDDNWVVPVNNIPQDWKPGATYDSGVQVNI* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01024 236 SUPERFAMILY PHL pollen allergen 133 230 IPR036749 -
Pte14g01024 236 SUPERFAMILY Barwin-like endoglucanases 9 132 IPR036908 -
Pte14g01024 236 PRINTS Expansin/Lol pI family signature 216 230 IPR007118 GO:0005576
Pte14g01024 236 PRINTS Expansin/Lol pI family signature 28 46 IPR007118 GO:0005576
Pte14g01024 236 PRINTS Expansin/Lol pI family signature 116 132 IPR007118 GO:0005576
Pte14g01024 236 PANTHER EXPANSIN-B3 14 233 - -
Pte14g01024 236 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 147 230 IPR007117 -
Pte14g01024 236 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 29 133 IPR007112 -
Pte14g01024 236 Gene3D - 2 129 IPR036908 -
Pte14g01024 236 CDD DPBB_EXLB_N 12 128 - -
Pte14g01024 236 Gene3D - 130 234 IPR036749 -
Pte14g01024 236 Pfam Lytic transglycolase 50 123 IPR009009 -
Pte14g01024 236 Pfam Expansin C-terminal domain 135 218 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01024 Pte-Chr14 31918252 31919561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01024 11 234 Expansin Gene Family AT4G17030 44.889 2.81e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01024 - - ccaj:109799868 410.994