Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g01019 ATGGCTGTTCAAGCTCAATACCCTTCGAATGTCCTCCTTTTAAACAGAAACGGACAAGAAGGGCATGAGTTTTCATTACCACCACAACCAGGAGGTTTTCTTGATCAATCCCAAATGTTATACAGCAATGGAGCTAGTGTTCATTCACGCAAGAGAGGAAGAGATGTTACAACTGCAGCAAGTGGGGTCATCCAAACAGTTCCTAACAATGTTAATGTTATAAATCCGTTCTCTAATCTGCAATCACAAACTCCTCAGCTGATAGAACTCTCTCAGCTCCACAATCAGCAGCACAATGTGGTCTCCACCGGACTTTGCTTGTCTTTCGGCGACCAACAACAACAACATCATCATCGGCTGCAATTACAGCAGCAGCAGCAAAATATGTCTCATCCCTCTGCTTTCTTATCTTTATTGTCTGAAGGATTTCCCTCACAAATCAAACAGCAGAGGGATGAAATCGATCAATTTCTTCAAGCCCAGGCCGAGCAATTGCGGCGGACGTTGGACGAGAAGAGACAGAAACACTACCGTGCCCTGATTACCACAGCGGAAGAATCATTGGCCCGACGATTAAGAGAGAAGGAATCGGAGGTAGAGAAGGCGACAAGAAGAAATGCAGAGCTAGAAGCACGCGCTGCACAACTTGGTGTGGAAACGCAAATATGGCAAGCGAAGGCGAAAGCACAGGAAGCCACCGCAGCTTCTATACAAGCACAAATACAGCATGCTATAATGATAGGAGGTCGGGTGATAGGTGCGCAGGACAAACGGGATGACGGTTTTGGCACCGGCGGGGTAACTTGCGCCGGGGGTGGCGGAGAAGGCCAAGCGGATGATGCGGAGTCGGCTTATGTTGACCCTGAACGGGTCACGGTACCGGGTCCGAAATGTAGAGGGTGTGAGAAACGGGTCGCTTCGGTGGTTGTGCTGCCGTGTAGGCACCTATGCATCTGTACAGAGTGCGACAAGCATTTTCGGGCGTGCCCGGTTTGCCTGTCCGTAAAGAATTCGACCGTGGAAGTCTATCTTTCTTAA 1038 0.4913 MAVQAQYPSNVLLLNRNGQEGHEFSLPPQPGGFLDQSQMLYSNGASVHSRKRGRDVTTAASGVIQTVPNNVNVINPFSNLQSQTPQLIELSQLHNQQHNVVSTGLCLSFGDQQQQHHHRLQLQQQQQNMSHPSAFLSLLSEGFPSQIKQQRDEIDQFLQAQAEQLRRTLDEKRQKHYRALITTAEESLARRLREKESEVEKATRRNAELEARAAQLGVETQIWQAKAKAQEATAASIQAQIQHAIMIGGRVIGAQDKRDDGFGTGGVTCAGGGGEGQADDAESAYVDPERVTVPGPKCRGCEKRVASVVVLPCRHLCICTECDKHFRACPVCLSVKNSTVEVYLS* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g01019 345 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 280 344 - -
Pte14g01019 345 Coils Coil 155 175 - -
Pte14g01019 345 PIRSF SBP1_RNase_bind 1 345 IPR017066 -
Pte14g01019 345 Coils Coil 185 219 - -
Pte14g01019 345 CDD mRING-HC-C3HC5_CGRF1-like 296 332 - -
Pte14g01019 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 278 345 IPR013083 -
Pte14g01019 345 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 44 342 IPR017066 -
Pte14g01019 345 ProSiteProfiles Zinc finger RING-type profile. 298 332 IPR001841 -
Pte14g01019 345 Pfam Zinc finger, C3HC4 type (RING finger) 297 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g01019 Pte-Chr14 31849948 31852486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g01019 295 332 C3H Transcription Factor Family AT3G06140 42.857 6.71e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g01019 K19042 - qsa:O6P43_024439 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g01019 14 31849948 31852486 Pte14g01019 14 31849948 31852486 RCT