Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00998 ATGGAGATCAAAGATGTGACCAGGAAAGGAGTGGATCGAATTAAGGGTCCGTGGAGTCCCGAGGAAGATGAGGCTCTTCAAAAGCTTGTAGAGAAACATGGAGCCAGAAACTGGTCTTTGATCAGTAAATCTATCCCGGGTCGATCGGGAAAGTCGTGTCGGCTACGATGGTGTAATCAACTCTCTCCTCAGGTGGAGCACCGTGCTTTCACACCTGAAGAGGATGAGGCTATCATCAGGGCTCACGCCCGATTCGGAAATAAGTGGGCTACCATCGCCAGGCTATTGTCGGGTCGGACCGATAACGCCATCAAGAACCACTGGAACTCCACCTTGAAGCGCAAGTGCTCGGCGATGATGGCGGAGGAAGGCGGAGCTCTTTGCGGGTTTAATGGAAACTTGAACCCACAGCCATTGAAGAGATCGGCGAGTACTGGTTCGGCCATGCCAGTGCCCACTACGATTTATATGAATCCGCCAACACCTGGTAGTCCATCTGGGTCCGATGTCAGCGACTCCAATGCACATGTTGCGTCACCTTCTCACGTCTTCCGTCCTTTTCCAAAAGCCGGCGGTATTCTTCCTCCTGCAGAAGCGACGCCATCTTCTGTAGACCCTCCAACCTCATTGTCTCTTTCGTTACCAGGTATTGATTCTGCAGAACTGTCAGACGGGACAGAGAGAGCCCAGCTCCCTCATGCAGCGAACCCCGTATCTTTTATGCCGGCGGCAACCTCGTCGCCTTCGGCGGTCCCGTTGCAGCAGAGATTTCAGCAGGTGCAGTTGGGTCAAGACGAAGAGTCGGGCAACCGAGTTTTGTCGGCGGCAACTGGAGTAAACCCGAAAGTGACAGTGCCGTTCAGTTTCAGTGCAGAATTGATGGCTGTGATGCAAGAGATGATAAAGAAGGAAGTTAGGAACTACATGGTGGGGTTGGAGCAAAATGGTAATGTGAATGGCCATGGGGGTGGGATGTGTATACAGCAAGCAGTCAGTGGGTTTAGGAATAATGTGTCCGTAAACCGATTTGGGGTTAGCAAGATAGACAATTGA 1053 0.5185 MEIKDVTRKGVDRIKGPWSPEEDEALQKLVEKHGARNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEAIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSAMMAEEGGALCGFNGNLNPQPLKRSASTGSAMPVPTTIYMNPPTPGSPSGSDVSDSNAHVASPSHVFRPFPKAGGILPPAEATPSSVDPPTSLSLSLPGIDSAELSDGTERAQLPHAANPVSFMPAATSSPSAVPLQQRFQQVQLGQDEESGNRVLSAATGVNPKVTVPFSFSAELMAVMQEMIKKEVRNYMVGLEQNGNVNGHGGGMCIQQAVSGFRNNVSVNRFGVSKIDN* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00998 350 CDD SANT 69 112 IPR001005 -
Pte14g00998 350 Gene3D - 68 125 - -
Pte14g00998 350 SMART sant 14 63 IPR001005 -
Pte14g00998 350 SMART sant 66 114 IPR001005 -
Pte14g00998 350 MobiDBLite consensus disorder prediction 140 178 - -
Pte14g00998 350 MobiDBLite consensus disorder prediction 140 210 - -
Pte14g00998 350 PANTHER MYB PROTEIN-RELATED 15 198 - -
Pte14g00998 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Pte14g00998 350 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 116 IPR017930 -
Pte14g00998 350 FunFam Transcription factor MYB44 69 115 - -
Pte14g00998 350 CDD SANT 17 59 IPR001005 -
Pte14g00998 350 Gene3D - 14 66 - -
Pte14g00998 350 FunFam MYB transcription factor 15 66 - -
Pte14g00998 350 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Pte14g00998 350 Pfam Myb-like DNA-binding domain 18 76 - -
Pte14g00998 350 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Pte14g00998 350 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00998 Pte-Chr14 31572731 31573901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00998 7 349 MYB Transcription Factor Family AT4G37260 51.695 1.23e-98 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte14g00998 Myb_DNA-bind_6 1.1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte14g00998 K09422 - qsa:O6P43_024595 427.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00998 14 31572731 31573901 Pte12g00323 12 2651434 2653326 RCT
Pte14g00998 14 31572731 31573901 Pte2g01146 2 12506157 12507101 RCT
Pte2g01146 2 12506157 12507101 Pte14g00998 14 31572731 31573901 RCT
Pte14g00998 14 31572731 31573901 Pte14g00998 14 31572731 31573901 RCT